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<h1 class="epydoc">Source Code for <a href="weblogolib._cgi-module.html">Module weblogolib._cgi</a></h1>
<pre class="py-src">
<a name="L1"></a><tt class="py-lineno">  1</tt>  <tt class="py-line"><tt class="py-comment">#!/usr/bin/env python</tt> </tt>
<a name="L2"></a><tt class="py-lineno">  2</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L3"></a><tt class="py-lineno">  3</tt>  <tt class="py-line"><tt class="py-comment">#  Copyright (c) 2003-2004 The Regents of the University of California.</tt> </tt>
<a name="L4"></a><tt class="py-lineno">  4</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  Copyright (c) 2005 Gavin E. Crooks</tt> </tt>
<a name="L5"></a><tt class="py-lineno">  5</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  Copyright (c) 2006, The Regents of the University of California, through </tt> </tt>
<a name="L6"></a><tt class="py-lineno">  6</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  Lawrence Berkeley National Laboratory (subject to receipt of any required</tt> </tt>
<a name="L7"></a><tt class="py-lineno">  7</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  approvals from the U.S. Dept. of Energy).  All rights reserved.</tt> </tt>
<a name="L8"></a><tt class="py-lineno">  8</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L9"></a><tt class="py-lineno">  9</tt>  <tt class="py-line"><tt class="py-comment">#  This software is distributed under the new BSD Open Source License.</tt> </tt>
<a name="L10"></a><tt class="py-lineno"> 10</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  &lt;http://www.opensource.org/licenses/bsd-license.html&gt;</tt> </tt>
<a name="L11"></a><tt class="py-lineno"> 11</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#</tt> </tt>
<a name="L12"></a><tt class="py-lineno"> 12</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  Redistribution and use in source and binary forms, with or without </tt> </tt>
<a name="L13"></a><tt class="py-lineno"> 13</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  modification, are permitted provided that the following conditions are met: </tt> </tt>
<a name="L14"></a><tt class="py-lineno"> 14</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#</tt> </tt>
<a name="L15"></a><tt class="py-lineno"> 15</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  (1) Redistributions of source code must retain the above copyright notice, </tt> </tt>
<a name="L16"></a><tt class="py-lineno"> 16</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  this list of conditions and the following disclaimer. </tt> </tt>
<a name="L17"></a><tt class="py-lineno"> 17</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#</tt> </tt>
<a name="L18"></a><tt class="py-lineno"> 18</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  (2) Redistributions in binary form must reproduce the above copyright </tt> </tt>
<a name="L19"></a><tt class="py-lineno"> 19</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  notice, this list of conditions and the following disclaimer in the </tt> </tt>
<a name="L20"></a><tt class="py-lineno"> 20</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  documentation and or other materials provided with the distribution. </tt> </tt>
<a name="L21"></a><tt class="py-lineno"> 21</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#</tt> </tt>
<a name="L22"></a><tt class="py-lineno"> 22</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  (3) Neither the name of the University of California, Lawrence Berkeley </tt> </tt>
<a name="L23"></a><tt class="py-lineno"> 23</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  National Laboratory, U.S. Dept. of Energy nor the names of its contributors </tt> </tt>
<a name="L24"></a><tt class="py-lineno"> 24</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  may be used to endorse or promote products derived from this software </tt> </tt>
<a name="L25"></a><tt class="py-lineno"> 25</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  without specific prior written permission. </tt> </tt>
<a name="L26"></a><tt class="py-lineno"> 26</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#</tt> </tt>
<a name="L27"></a><tt class="py-lineno"> 27</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" </tt> </tt>
<a name="L28"></a><tt class="py-lineno"> 28</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE </tt> </tt>
<a name="L29"></a><tt class="py-lineno"> 29</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE </tt> </tt>
<a name="L30"></a><tt class="py-lineno"> 30</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE </tt> </tt>
<a name="L31"></a><tt class="py-lineno"> 31</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR </tt> </tt>
<a name="L32"></a><tt class="py-lineno"> 32</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF </tt> </tt>
<a name="L33"></a><tt class="py-lineno"> 33</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS </tt> </tt>
<a name="L34"></a><tt class="py-lineno"> 34</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN </tt> </tt>
<a name="L35"></a><tt class="py-lineno"> 35</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) </tt> </tt>
<a name="L36"></a><tt class="py-lineno"> 36</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE </tt> </tt>
<a name="L37"></a><tt class="py-lineno"> 37</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  POSSIBILITY OF SUCH DAMAGE. </tt> </tt>
<a name="L38"></a><tt class="py-lineno"> 38</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L39"></a><tt class="py-lineno"> 39</tt>  <tt class="py-line"><tt class="py-keyword">import</tt> <tt class="py-name">sys</tt> </tt>
<a name="L40"></a><tt class="py-lineno"> 40</tt>  <tt class="py-line"><tt class="py-keyword">import</tt> <tt class="py-name">cgi</tt> <tt class="py-name">as</tt> <tt class="py-name">cgilib</tt> </tt>
<a name="L41"></a><tt class="py-lineno"> 41</tt>  <tt class="py-line"><tt class="py-keyword">import</tt> <tt class="py-name">cgitb</tt><tt class="py-op">;</tt> <tt class="py-name">cgitb</tt><tt class="py-op">.</tt><tt class="py-name">enable</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L42"></a><tt class="py-lineno"> 42</tt>  <tt class="py-line"> </tt>
<a name="L43"></a><tt class="py-lineno"> 43</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt class="py-name">StringIO</tt> <tt class="py-keyword">import</tt> <tt class="py-name">StringIO</tt> </tt>
<a name="L44"></a><tt class="py-lineno"> 44</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt id="link-0" class="py-name" targets="Module weblogolib.color=weblogolib.color-module.html,Method weblogolib.colorscheme.ColorScheme.color()=weblogolib.colorscheme.ColorScheme-class.html#color"><a title="weblogolib.color
weblogolib.colorscheme.ColorScheme.color" class="py-name" href="#" onclick="return doclink('link-0', 'color', 'link-0');">color</a></tt> <tt class="py-keyword">import</tt> <tt class="py-op">*</tt> </tt>
<a name="L45"></a><tt class="py-lineno"> 45</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt id="link-1" class="py-name" targets="Module weblogolib.colorscheme=weblogolib.colorscheme-module.html"><a title="weblogolib.colorscheme" class="py-name" href="#" onclick="return doclink('link-1', 'colorscheme', 'link-1');">colorscheme</a></tt> <tt class="py-keyword">import</tt> <tt id="link-2" class="py-name" targets="Class weblogolib.colorscheme.ColorScheme=weblogolib.colorscheme.ColorScheme-class.html"><a title="weblogolib.colorscheme.ColorScheme" class="py-name" href="#" onclick="return doclink('link-2', 'ColorScheme', 'link-2');">ColorScheme</a></tt><tt class="py-op">,</tt> <tt id="link-3" class="py-name" targets="Class weblogolib.colorscheme.ColorGroup=weblogolib.colorscheme.ColorGroup-class.html"><a title="weblogolib.colorscheme.ColorGroup" class="py-name" href="#" onclick="return doclink('link-3', 'ColorGroup', 'link-3');">ColorGroup</a></tt> </tt>
<a name="L46"></a><tt class="py-lineno"> 46</tt>  <tt class="py-line"> </tt>
<a name="L47"></a><tt class="py-lineno"> 47</tt>  <tt class="py-line"><tt class="py-keyword">import</tt> <tt id="link-4" class="py-name" targets="Package weblogolib=weblogolib-module.html"><a title="weblogolib" class="py-name" href="#" onclick="return doclink('link-4', 'weblogolib', 'link-4');">weblogolib</a></tt> </tt>
<a name="L48"></a><tt class="py-lineno"> 48</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt class="py-name">corebio</tt><tt class="py-op">.</tt><tt class="py-name">utils</tt> <tt class="py-keyword">import</tt> <tt class="py-op">*</tt> </tt>
<a name="L49"></a><tt class="py-lineno"> 49</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt class="py-name">string</tt> <tt class="py-keyword">import</tt> <tt class="py-name">Template</tt> </tt>
<a name="L50"></a><tt class="py-lineno"> 50</tt>  <tt class="py-line"> </tt>
<a name="L51"></a><tt class="py-lineno"> 51</tt>  <tt class="py-line"> </tt>
<a name="L52"></a><tt class="py-lineno"> 52</tt>  <tt class="py-line"><tt class="py-comment"># TODO: Check units</tt> </tt>
<a name="L53"></a><tt class="py-lineno"> 53</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L54"></a><tt class="py-lineno"> 54</tt>  <tt class="py-line"><tt class="py-comment"># TODO: In WebLogo2: why slash create.cgi? I think this was a workaround</tt> </tt>
<a name="L55"></a><tt class="py-lineno"> 55</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment"># for some browser quirk</tt> </tt>
<a name="L56"></a><tt class="py-lineno"> 56</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#&lt;form method="post" action="/create.cgi" enctype="multipart/form-data"&gt;</tt> </tt>
<a name="L57"></a><tt class="py-lineno"> 57</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L58"></a><tt class="py-lineno"> 58</tt>  <tt class="py-line"> </tt>
<a name="L59"></a><tt class="py-lineno"> 59</tt>  <tt class="py-line"><tt class="py-comment"># Should replace with corebio.utils?    </tt> </tt>
<a name="resource_string"></a><div id="resource_string-def"><a name="L60"></a><tt class="py-lineno"> 60</tt> <a class="py-toggle" href="#" id="resource_string-toggle" onclick="return toggle('resource_string');">-</a><tt class="py-line"><tt class="py-comment"></tt><tt class="py-keyword">def</tt> <a class="py-def-name" href="weblogolib._cgi-module.html#resource_string">resource_string</a><tt class="py-op">(</tt><tt class="py-param">resource</tt><tt class="py-op">,</tt> <tt class="py-param">basefilename</tt><tt class="py-op">)</tt> <tt class="py-op">:</tt> </tt>
</div><div id="resource_string-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="resource_string-expanded"><a name="L61"></a><tt class="py-lineno"> 61</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">os</tt> </tt>
<a name="L62"></a><tt class="py-lineno"> 62</tt>  <tt class="py-line">    <tt class="py-name">fn</tt> <tt class="py-op">=</tt>  <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">dirname</tt><tt class="py-op">(</tt><tt class="py-name">basefilename</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">resource</tt><tt class="py-op">)</tt> </tt>
<a name="L63"></a><tt class="py-lineno"> 63</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">open</tt><tt class="py-op">(</tt> <tt class="py-name">fn</tt> <tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">read</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L64"></a><tt class="py-lineno"> 64</tt>  <tt class="py-line"> </tt>
<a name="L65"></a><tt class="py-lineno"> 65</tt>  <tt class="py-line"><tt id="link-5" class="py-name" targets="Variable weblogolib._cgi.mime_type=weblogolib._cgi-module.html#mime_type"><a title="weblogolib._cgi.mime_type" class="py-name" href="#" onclick="return doclink('link-5', 'mime_type', 'link-5');">mime_type</a></tt> <tt class="py-op">=</tt> <tt class="py-op">{</tt> </tt>
<a name="L66"></a><tt class="py-lineno"> 66</tt>  <tt class="py-line">    <tt class="py-string">'eps'</tt><tt class="py-op">:</tt> <tt class="py-string">'application/postscript'</tt><tt class="py-op">,</tt>  </tt>
<a name="L67"></a><tt class="py-lineno"> 67</tt>  <tt class="py-line">    <tt class="py-string">'pdf'</tt><tt class="py-op">:</tt> <tt class="py-string">'application/pdf'</tt><tt class="py-op">,</tt> </tt>
<a name="L68"></a><tt class="py-lineno"> 68</tt>  <tt class="py-line">    <tt class="py-string">'svg'</tt><tt class="py-op">:</tt> <tt class="py-string">'image/svg+xml'</tt><tt class="py-op">,</tt> </tt>
<a name="L69"></a><tt class="py-lineno"> 69</tt>  <tt class="py-line">    <tt class="py-string">'png'</tt><tt class="py-op">:</tt> <tt class="py-string">'image/png'</tt><tt class="py-op">,</tt> </tt>
<a name="L70"></a><tt class="py-lineno"> 70</tt>  <tt class="py-line">    <tt class="py-string">'png_print'</tt><tt class="py-op">:</tt> <tt class="py-string">'image/png'</tt><tt class="py-op">,</tt>     </tt>
<a name="L71"></a><tt class="py-lineno"> 71</tt>  <tt class="py-line">    <tt class="py-string">'logodata'</tt> <tt class="py-op">:</tt> <tt class="py-string">'text/plain'</tt><tt class="py-op">,</tt>        </tt>
<a name="L72"></a><tt class="py-lineno"> 72</tt>  <tt class="py-line">    <tt class="py-string">'jpeg'</tt>  <tt class="py-op">:</tt> <tt class="py-string">'image/jpeg'</tt><tt class="py-op">,</tt> </tt>
<a name="L73"></a><tt class="py-lineno"> 73</tt>  <tt class="py-line"><tt class="py-op">}</tt> </tt>
<a name="L74"></a><tt class="py-lineno"> 74</tt>  <tt class="py-line"> </tt>
<a name="L75"></a><tt class="py-lineno"> 75</tt>  <tt class="py-line"><tt id="link-6" class="py-name" targets="Variable weblogolib._cgi.extension=weblogolib._cgi-module.html#extension"><a title="weblogolib._cgi.extension" class="py-name" href="#" onclick="return doclink('link-6', 'extension', 'link-6');">extension</a></tt> <tt class="py-op">=</tt> <tt class="py-op">{</tt> </tt>
<a name="L76"></a><tt class="py-lineno"> 76</tt>  <tt class="py-line">    <tt class="py-string">'eps'</tt><tt class="py-op">:</tt> <tt class="py-string">'eps'</tt><tt class="py-op">,</tt> </tt>
<a name="L77"></a><tt class="py-lineno"> 77</tt>  <tt class="py-line">    <tt class="py-string">'pdf'</tt><tt class="py-op">:</tt> <tt class="py-string">'pdf'</tt><tt class="py-op">,</tt> </tt>
<a name="L78"></a><tt class="py-lineno"> 78</tt>  <tt class="py-line">    <tt class="py-string">'png'</tt><tt class="py-op">:</tt> <tt class="py-string">'png'</tt><tt class="py-op">,</tt> </tt>
<a name="L79"></a><tt class="py-lineno"> 79</tt>  <tt class="py-line">    <tt class="py-string">'svg'</tt><tt class="py-op">:</tt> <tt class="py-string">'svg'</tt><tt class="py-op">,</tt> </tt>
<a name="L80"></a><tt class="py-lineno"> 80</tt>  <tt class="py-line">    <tt class="py-string">'png_print'</tt><tt class="py-op">:</tt> <tt class="py-string">'png'</tt><tt class="py-op">,</tt> </tt>
<a name="L81"></a><tt class="py-lineno"> 81</tt>  <tt class="py-line">    <tt class="py-string">'logodata'</tt> <tt class="py-op">:</tt> <tt class="py-string">'txt'</tt><tt class="py-op">,</tt>         </tt>
<a name="L82"></a><tt class="py-lineno"> 82</tt>  <tt class="py-line">    <tt class="py-string">'jpeg'</tt>  <tt class="py-op">:</tt> <tt class="py-string">'jpeg'</tt> </tt>
<a name="L83"></a><tt class="py-lineno"> 83</tt>  <tt class="py-line"><tt class="py-op">}</tt> </tt>
<a name="L84"></a><tt class="py-lineno"> 84</tt>  <tt class="py-line"> </tt>
<a name="L85"></a><tt class="py-lineno"> 85</tt>  <tt class="py-line"> </tt>
<a name="L86"></a><tt class="py-lineno"> 86</tt>  <tt class="py-line"><tt id="link-7" class="py-name" targets="Variable weblogolib._cgi.alphabets=weblogolib._cgi-module.html#alphabets"><a title="weblogolib._cgi.alphabets" class="py-name" href="#" onclick="return doclink('link-7', 'alphabets', 'link-7');">alphabets</a></tt> <tt class="py-op">=</tt> <tt class="py-op">{</tt> </tt>
<a name="L87"></a><tt class="py-lineno"> 87</tt>  <tt class="py-line">    <tt class="py-string">'alphabet_auto'</tt><tt class="py-op">:</tt> <tt class="py-name">None</tt><tt class="py-op">,</tt>  </tt>
<a name="L88"></a><tt class="py-lineno"> 88</tt>  <tt class="py-line">    <tt class="py-string">'alphabet_protein'</tt><tt class="py-op">:</tt> <tt id="link-8" class="py-name"><a title="weblogolib" class="py-name" href="#" onclick="return doclink('link-8', 'weblogolib', 'link-4');">weblogolib</a></tt><tt class="py-op">.</tt><tt class="py-name">unambiguous_protein_alphabet</tt><tt class="py-op">,</tt>  </tt>
<a name="L89"></a><tt class="py-lineno"> 89</tt>  <tt class="py-line">    <tt class="py-string">'alphabet_rna'</tt><tt class="py-op">:</tt> <tt id="link-9" class="py-name"><a title="weblogolib" class="py-name" href="#" onclick="return doclink('link-9', 'weblogolib', 'link-4');">weblogolib</a></tt><tt class="py-op">.</tt><tt class="py-name">unambiguous_rna_alphabet</tt><tt class="py-op">,</tt> </tt>
<a name="L90"></a><tt class="py-lineno"> 90</tt>  <tt class="py-line">    <tt class="py-string">'alphabet_dna'</tt><tt class="py-op">:</tt> <tt id="link-10" class="py-name"><a title="weblogolib" class="py-name" href="#" onclick="return doclink('link-10', 'weblogolib', 'link-4');">weblogolib</a></tt><tt class="py-op">.</tt><tt class="py-name">unambiguous_dna_alphabet</tt><tt class="py-op">}</tt> </tt>
<a name="L91"></a><tt class="py-lineno"> 91</tt>  <tt class="py-line"> </tt>
<a name="L92"></a><tt class="py-lineno"> 92</tt>  <tt class="py-line"><tt id="link-11" class="py-name" targets="Variable weblogolib._cgi.color_schemes=weblogolib._cgi-module.html#color_schemes"><a title="weblogolib._cgi.color_schemes" class="py-name" href="#" onclick="return doclink('link-11', 'color_schemes', 'link-11');">color_schemes</a></tt> <tt class="py-op">=</tt> <tt class="py-op">{</tt><tt class="py-op">}</tt> </tt>
<a name="L93"></a><tt class="py-lineno"> 93</tt>  <tt class="py-line"><tt class="py-keyword">for</tt> <tt class="py-name">k</tt> <tt class="py-keyword">in</tt> <tt id="link-12" class="py-name"><a title="weblogolib" class="py-name" href="#" onclick="return doclink('link-12', 'weblogolib', 'link-4');">weblogolib</a></tt><tt class="py-op">.</tt><tt id="link-13" class="py-name" targets="Variable weblogolib.std_color_schemes=weblogolib-module.html#std_color_schemes"><a title="weblogolib.std_color_schemes" class="py-name" href="#" onclick="return doclink('link-13', 'std_color_schemes', 'link-13');">std_color_schemes</a></tt><tt class="py-op">.</tt><tt class="py-name">keys</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L94"></a><tt class="py-lineno"> 94</tt>  <tt class="py-line">    <tt id="link-14" class="py-name"><a title="weblogolib._cgi.color_schemes" class="py-name" href="#" onclick="return doclink('link-14', 'color_schemes', 'link-11');">color_schemes</a></tt><tt class="py-op">[</tt> <tt class="py-string">'color_'</tt><tt class="py-op">+</tt><tt class="py-name">k</tt><tt class="py-op">.</tt><tt class="py-name">replace</tt><tt class="py-op">(</tt><tt class="py-string">' '</tt><tt class="py-op">,</tt> <tt class="py-string">'_'</tt><tt class="py-op">)</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt id="link-15" class="py-name"><a title="weblogolib" class="py-name" href="#" onclick="return doclink('link-15', 'weblogolib', 'link-4');">weblogolib</a></tt><tt class="py-op">.</tt><tt id="link-16" class="py-name"><a title="weblogolib.std_color_schemes" class="py-name" href="#" onclick="return doclink('link-16', 'std_color_schemes', 'link-13');">std_color_schemes</a></tt><tt class="py-op">[</tt><tt class="py-name">k</tt><tt class="py-op">]</tt> </tt>
<a name="L95"></a><tt class="py-lineno"> 95</tt>  <tt class="py-line">     </tt>
<a name="L96"></a><tt class="py-lineno"> 96</tt>  <tt class="py-line"> </tt>
<a name="L97"></a><tt class="py-lineno"> 97</tt>  <tt class="py-line"><tt id="link-17" class="py-name" targets="Variable weblogolib._cgi.composition=weblogolib._cgi-module.html#composition"><a title="weblogolib._cgi.composition" class="py-name" href="#" onclick="return doclink('link-17', 'composition', 'link-17');">composition</a></tt> <tt class="py-op">=</tt> <tt class="py-op">{</tt><tt class="py-string">'comp_none'</tt> <tt class="py-op">:</tt> <tt class="py-string">'none'</tt><tt class="py-op">,</tt> </tt>
<a name="L98"></a><tt class="py-lineno"> 98</tt>  <tt class="py-line">    <tt class="py-string">'comp_auto'</tt> <tt class="py-op">:</tt> <tt class="py-string">'auto'</tt><tt class="py-op">,</tt> </tt>
<a name="L99"></a><tt class="py-lineno"> 99</tt>  <tt class="py-line">    <tt class="py-string">'comp_equiprobable'</tt><tt class="py-op">:</tt><tt class="py-string">'equiprobable'</tt><tt class="py-op">,</tt> </tt>
<a name="L100"></a><tt class="py-lineno">100</tt>  <tt class="py-line">    <tt class="py-string">'comp_CG'</tt><tt class="py-op">:</tt> <tt class="py-string">'percentCG'</tt><tt class="py-op">,</tt> </tt>
<a name="L101"></a><tt class="py-lineno">101</tt>  <tt class="py-line">    <tt class="py-string">'comp_Celegans'</tt> <tt class="py-op">:</tt> <tt class="py-string">'C. elegans'</tt><tt class="py-op">,</tt> </tt>
<a name="L102"></a><tt class="py-lineno">102</tt>  <tt class="py-line">    <tt class="py-string">'comp_Dmelanogaster'</tt> <tt class="py-op">:</tt> <tt class="py-string">'D. melanogaster'</tt><tt class="py-op">,</tt> </tt>
<a name="L103"></a><tt class="py-lineno">103</tt>  <tt class="py-line">    <tt class="py-string">'comp_Ecoli'</tt> <tt class="py-op">:</tt> <tt class="py-string">'E. coli'</tt><tt class="py-op">,</tt> </tt>
<a name="L104"></a><tt class="py-lineno">104</tt>  <tt class="py-line">    <tt class="py-string">'comp_Hsapiens'</tt><tt class="py-op">:</tt> <tt class="py-string">'H. sapiens'</tt><tt class="py-op">,</tt> </tt>
<a name="L105"></a><tt class="py-lineno">105</tt>  <tt class="py-line">    <tt class="py-string">'comp_Mmusculus'</tt> <tt class="py-op">:</tt> <tt class="py-string">'M. musculus'</tt><tt class="py-op">,</tt> </tt>
<a name="L106"></a><tt class="py-lineno">106</tt>  <tt class="py-line">    <tt class="py-string">'comp_Scerevisiae'</tt><tt class="py-op">:</tt> <tt class="py-string">'S. cerevisiae'</tt> </tt>
<a name="L107"></a><tt class="py-lineno">107</tt>  <tt class="py-line"><tt class="py-op">}</tt> </tt>
<a name="L108"></a><tt class="py-lineno">108</tt>  <tt class="py-line"> </tt>
<a name="Field"></a><div id="Field-def"><a name="L109"></a><tt class="py-lineno">109</tt> <a class="py-toggle" href="#" id="Field-toggle" onclick="return toggle('Field');">-</a><tt class="py-line"><tt class="py-keyword">class</tt> <a class="py-def-name" href="weblogolib._cgi.Field-class.html">Field</a><tt class="py-op">(</tt><tt class="py-base-class">object</tt><tt class="py-op">)</tt> <tt class="py-op">:</tt> </tt>
</div><div id="Field-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="Field-expanded"><a name="L110"></a><tt class="py-lineno">110</tt>  <tt class="py-line">    <tt class="py-docstring">""" A representation of an HTML form field."""</tt> </tt>
<a name="Field.__init__"></a><div id="Field.__init__-def"><a name="L111"></a><tt class="py-lineno">111</tt> <a class="py-toggle" href="#" id="Field.__init__-toggle" onclick="return toggle('Field.__init__');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="weblogolib._cgi.Field-class.html#__init__">__init__</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt> <tt class="py-param">name</tt><tt class="py-op">,</tt> <tt class="py-param">default</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">conversion</tt><tt class="py-op">=</tt> <tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">options</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">errmsg</tt><tt class="py-op">=</tt><tt class="py-string">"Illegal value."</tt><tt class="py-op">)</tt> <tt class="py-op">:</tt> </tt>
</div><div id="Field.__init__-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="Field.__init__-expanded"><a name="L112"></a><tt class="py-lineno">112</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">name</tt> <tt class="py-op">=</tt> <tt class="py-name">name</tt> </tt>
<a name="L113"></a><tt class="py-lineno">113</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">default</tt> <tt class="py-op">=</tt> <tt class="py-name">default</tt> </tt>
<a name="L114"></a><tt class="py-lineno">114</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">value</tt> <tt class="py-op">=</tt> <tt class="py-name">default</tt> </tt>
<a name="L115"></a><tt class="py-lineno">115</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">conversion</tt> <tt class="py-op">=</tt> <tt class="py-name">conversion</tt>         </tt>
<a name="L116"></a><tt class="py-lineno">116</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">options</tt> <tt class="py-op">=</tt> <tt class="py-name">options</tt> </tt>
<a name="L117"></a><tt class="py-lineno">117</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">errmsg</tt> <tt class="py-op">=</tt> <tt class="py-name">errmsg</tt> </tt>
</div><a name="L118"></a><tt class="py-lineno">118</tt>  <tt class="py-line"> </tt>
<a name="Field.get_value"></a><div id="Field.get_value-def"><a name="L119"></a><tt class="py-lineno">119</tt> <a class="py-toggle" href="#" id="Field.get_value-toggle" onclick="return toggle('Field.get_value');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="weblogolib._cgi.Field-class.html#get_value">get_value</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt> <tt class="py-op">:</tt> </tt>
</div><div id="Field.get_value-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="Field.get_value-expanded"><a name="L120"></a><tt class="py-lineno">120</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">options</tt> <tt class="py-op">:</tt> </tt>
<a name="L121"></a><tt class="py-lineno">121</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">value</tt> <tt class="py-keyword">in</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">options</tt> <tt class="py-op">:</tt> </tt>
<a name="L122"></a><tt class="py-lineno">122</tt>  <tt class="py-line">                <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">name</tt><tt class="py-op">,</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">errmsg</tt><tt class="py-op">)</tt> </tt>
<a name="L123"></a><tt class="py-lineno">123</tt>  <tt class="py-line">                 </tt>
<a name="L124"></a><tt class="py-lineno">124</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">conversion</tt> <tt class="py-op">:</tt> </tt>
<a name="L125"></a><tt class="py-lineno">125</tt>  <tt class="py-line">            <tt class="py-keyword">try</tt> <tt class="py-op">:</tt> </tt>
<a name="L126"></a><tt class="py-lineno">126</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">conversion</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">value</tt><tt class="py-op">)</tt> </tt>
<a name="L127"></a><tt class="py-lineno">127</tt>  <tt class="py-line">            <tt class="py-keyword">except</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-name">e</tt> <tt class="py-op">:</tt> </tt>
<a name="L128"></a><tt class="py-lineno">128</tt>  <tt class="py-line">                <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">name</tt><tt class="py-op">,</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">errmsg</tt><tt class="py-op">)</tt> </tt>
<a name="L129"></a><tt class="py-lineno">129</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L130"></a><tt class="py-lineno">130</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">value</tt> </tt>
</div></div><a name="L131"></a><tt class="py-lineno">131</tt>  <tt class="py-line">     </tt>
<a name="L132"></a><tt class="py-lineno">132</tt>  <tt class="py-line">     </tt>
<a name="string_or_none"></a><div id="string_or_none-def"><a name="L133"></a><tt class="py-lineno">133</tt> <a class="py-toggle" href="#" id="string_or_none-toggle" onclick="return toggle('string_or_none');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="weblogolib._cgi-module.html#string_or_none">string_or_none</a><tt class="py-op">(</tt><tt class="py-param">value</tt><tt class="py-op">)</tt> <tt class="py-op">:</tt> </tt>
</div><div id="string_or_none-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="string_or_none-expanded"><a name="L134"></a><tt class="py-lineno">134</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">value</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt> <tt class="py-keyword">or</tt> <tt class="py-name">value</tt> <tt class="py-op">==</tt> <tt class="py-string">'auto'</tt><tt class="py-op">:</tt> </tt>
<a name="L135"></a><tt class="py-lineno">135</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">None</tt> </tt>
<a name="L136"></a><tt class="py-lineno">136</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">str</tt><tt class="py-op">(</tt><tt class="py-name">value</tt><tt class="py-op">)</tt> </tt>
</div><a name="L137"></a><tt class="py-lineno">137</tt>  <tt class="py-line">     </tt>
<a name="truth"></a><div id="truth-def"><a name="L138"></a><tt class="py-lineno">138</tt> <a class="py-toggle" href="#" id="truth-toggle" onclick="return toggle('truth');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="weblogolib._cgi-module.html#truth">truth</a><tt class="py-op">(</tt><tt class="py-param">value</tt><tt class="py-op">)</tt> <tt class="py-op">:</tt> </tt>
</div><div id="truth-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="truth-expanded"><a name="L139"></a><tt class="py-lineno">139</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">value</tt><tt class="py-op">==</tt> <tt class="py-string">"true"</tt> <tt class="py-op">:</tt> <tt class="py-keyword">return</tt> <tt class="py-name">True</tt> </tt>
<a name="L140"></a><tt class="py-lineno">140</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">bool</tt><tt class="py-op">(</tt><tt class="py-name">value</tt><tt class="py-op">)</tt> </tt>
</div><a name="L141"></a><tt class="py-lineno">141</tt>  <tt class="py-line"> </tt>
<a name="int_or_none"></a><div id="int_or_none-def"><a name="L142"></a><tt class="py-lineno">142</tt> <a class="py-toggle" href="#" id="int_or_none-toggle" onclick="return toggle('int_or_none');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="weblogolib._cgi-module.html#int_or_none">int_or_none</a><tt class="py-op">(</tt><tt class="py-param">value</tt><tt class="py-op">)</tt> <tt class="py-op">:</tt> </tt>
</div><div id="int_or_none-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="int_or_none-expanded"><a name="L143"></a><tt class="py-lineno">143</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">value</tt> <tt class="py-op">==</tt><tt class="py-string">''</tt> <tt class="py-keyword">or</tt> <tt class="py-name">value</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt> <tt class="py-keyword">or</tt> <tt class="py-name">value</tt> <tt class="py-op">==</tt> <tt class="py-string">'auto'</tt><tt class="py-op">:</tt> </tt>
<a name="L144"></a><tt class="py-lineno">144</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">None</tt> </tt>
<a name="L145"></a><tt class="py-lineno">145</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">value</tt><tt class="py-op">)</tt> </tt>
</div><a name="L146"></a><tt class="py-lineno">146</tt>  <tt class="py-line">     </tt>
<a name="float_or_none"></a><div id="float_or_none-def"><a name="L147"></a><tt class="py-lineno">147</tt> <a class="py-toggle" href="#" id="float_or_none-toggle" onclick="return toggle('float_or_none');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="weblogolib._cgi-module.html#float_or_none">float_or_none</a><tt class="py-op">(</tt><tt class="py-param">value</tt><tt class="py-op">)</tt> <tt class="py-op">:</tt> </tt>
</div><div id="float_or_none-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="float_or_none-expanded"><a name="L148"></a><tt class="py-lineno">148</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">value</tt> <tt class="py-op">==</tt><tt class="py-string">''</tt> <tt class="py-keyword">or</tt> <tt class="py-name">value</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt> <tt class="py-keyword">or</tt> <tt class="py-name">value</tt> <tt class="py-op">==</tt> <tt class="py-string">'auto'</tt><tt class="py-op">:</tt> </tt>
<a name="L149"></a><tt class="py-lineno">149</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">None</tt> </tt>
<a name="L150"></a><tt class="py-lineno">150</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">float</tt><tt class="py-op">(</tt><tt class="py-name">value</tt><tt class="py-op">)</tt> </tt>
</div><a name="L151"></a><tt class="py-lineno">151</tt>  <tt class="py-line">         </tt>
<a name="L152"></a><tt class="py-lineno">152</tt>  <tt class="py-line"> </tt>
<a name="main"></a><div id="main-def"><a name="L153"></a><tt class="py-lineno">153</tt> <a class="py-toggle" href="#" id="main-toggle" onclick="return toggle('main');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="weblogolib._cgi-module.html#main">main</a><tt class="py-op">(</tt><tt class="py-param">htdocs_directory</tt> <tt class="py-op">=</tt> <tt class="py-name">None</tt><tt class="py-op">)</tt> <tt class="py-op">:</tt> </tt>
</div><div id="main-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="main-expanded"><a name="L154"></a><tt class="py-lineno">154</tt>  <tt class="py-line">  </tt>
<a name="L155"></a><tt class="py-lineno">155</tt>  <tt class="py-line">    <tt class="py-name">logooptions</tt> <tt class="py-op">=</tt> <tt id="link-18" class="py-name"><a title="weblogolib" class="py-name" href="#" onclick="return doclink('link-18', 'weblogolib', 'link-4');">weblogolib</a></tt><tt class="py-op">.</tt><tt id="link-19" class="py-name" targets="Class weblogolib.LogoOptions=weblogolib.LogoOptions-class.html"><a title="weblogolib.LogoOptions" class="py-name" href="#" onclick="return doclink('link-19', 'LogoOptions', 'link-19');">LogoOptions</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt>  </tt>
<a name="L156"></a><tt class="py-lineno">156</tt>  <tt class="py-line">       </tt>
<a name="L157"></a><tt class="py-lineno">157</tt>  <tt class="py-line">    <tt class="py-comment"># A list of form fields.</tt> </tt>
<a name="L158"></a><tt class="py-lineno">158</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># The default for checkbox values must be False (irrespective of</tt> </tt>
<a name="L159"></a><tt class="py-lineno">159</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># the default in logooptions) since a checked checkbox returns 'true'</tt> </tt>
<a name="L160"></a><tt class="py-lineno">160</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># but an unchecked checkbox returns nothing.</tt> </tt>
<a name="L161"></a><tt class="py-lineno">161</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">controls</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt> </tt>
<a name="L162"></a><tt class="py-lineno">162</tt>  <tt class="py-line">        <tt id="link-20" class="py-name" targets="Class weblogolib._cgi.Field=weblogolib._cgi.Field-class.html"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-20', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'sequences'</tt><tt class="py-op">,</tt> <tt class="py-string">''</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L163"></a><tt class="py-lineno">163</tt>  <tt class="py-line">        <tt id="link-21" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-21', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'format'</tt><tt class="py-op">,</tt> <tt class="py-string">'png'</tt><tt class="py-op">,</tt> <tt id="link-22" class="py-name"><a title="weblogolib" class="py-name" href="#" onclick="return doclink('link-22', 'weblogolib', 'link-4');">weblogolib</a></tt><tt class="py-op">.</tt><tt id="link-23" class="py-name" targets="Variable weblogolib.formatters=weblogolib-module.html#formatters"><a title="weblogolib.formatters" class="py-name" href="#" onclick="return doclink('link-23', 'formatters', 'link-23');">formatters</a></tt><tt class="py-op">.</tt><tt class="py-name">get</tt> <tt class="py-op">,</tt> </tt>
<a name="L164"></a><tt class="py-lineno">164</tt>  <tt class="py-line">            <tt class="py-name">options</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'png_print'</tt><tt class="py-op">,</tt> <tt class="py-string">'png'</tt><tt class="py-op">,</tt> <tt class="py-string">'jpeg'</tt><tt class="py-op">,</tt> <tt class="py-string">'eps'</tt><tt class="py-op">,</tt> <tt class="py-string">'pdf'</tt><tt class="py-op">,</tt> <tt class="py-string">'svg'</tt><tt class="py-op">,</tt> <tt class="py-string">'logodata'</tt><tt class="py-op">]</tt> <tt class="py-op">,</tt> <tt class="py-comment">#TODO: Should copy list from __init__.formatters</tt> </tt>
<a name="L165"></a><tt class="py-lineno">165</tt>  <tt class="py-line">            <tt class="py-name">errmsg</tt><tt class="py-op">=</tt><tt class="py-string">"Unknown format option."</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L166"></a><tt class="py-lineno">166</tt>  <tt class="py-line">        <tt id="link-24" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-24', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'stacks_per_line'</tt><tt class="py-op">,</tt> <tt class="py-name">logooptions</tt><tt class="py-op">.</tt><tt class="py-name">stacks_per_line</tt> <tt class="py-op">,</tt> <tt class="py-name">int</tt><tt class="py-op">,</tt>  </tt>
<a name="L167"></a><tt class="py-lineno">167</tt>  <tt class="py-line">            <tt class="py-name">errmsg</tt><tt class="py-op">=</tt><tt class="py-string">'Invalid number of stacks per line.'</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L168"></a><tt class="py-lineno">168</tt>  <tt class="py-line">        <tt id="link-25" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-25', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'stack_width'</tt><tt class="py-op">,</tt><tt class="py-string">'medium'</tt><tt class="py-op">,</tt> <tt id="link-26" class="py-name"><a title="weblogolib" class="py-name" href="#" onclick="return doclink('link-26', 'weblogolib', 'link-4');">weblogolib</a></tt><tt class="py-op">.</tt><tt id="link-27" class="py-name" targets="Variable weblogolib.std_sizes=weblogolib-module.html#std_sizes"><a title="weblogolib.std_sizes" class="py-name" href="#" onclick="return doclink('link-27', 'std_sizes', 'link-27');">std_sizes</a></tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">,</tt> </tt>
<a name="L169"></a><tt class="py-lineno">169</tt>  <tt class="py-line">            <tt class="py-name">options</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'small'</tt><tt class="py-op">,</tt> <tt class="py-string">'medium'</tt><tt class="py-op">,</tt> <tt class="py-string">'large'</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-name">errmsg</tt><tt class="py-op">=</tt><tt class="py-string">'Invalid logo size.'</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L170"></a><tt class="py-lineno">170</tt>  <tt class="py-line">        <tt id="link-28" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-28', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'alphabet'</tt><tt class="py-op">,</tt><tt class="py-string">'alphabet_auto'</tt><tt class="py-op">,</tt> <tt id="link-29" class="py-name"><a title="weblogolib._cgi.alphabets" class="py-name" href="#" onclick="return doclink('link-29', 'alphabets', 'link-7');">alphabets</a></tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">,</tt> </tt>
<a name="L171"></a><tt class="py-lineno">171</tt>  <tt class="py-line">            <tt class="py-name">options</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'alphabet_auto'</tt><tt class="py-op">,</tt> <tt class="py-string">'alphabet_protein'</tt><tt class="py-op">,</tt> <tt class="py-string">'alphabet_dna'</tt><tt class="py-op">,</tt>  </tt>
<a name="L172"></a><tt class="py-lineno">172</tt>  <tt class="py-line">                        <tt class="py-string">'alphabet_rna'</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> </tt>
<a name="L173"></a><tt class="py-lineno">173</tt>  <tt class="py-line">            <tt class="py-name">errmsg</tt><tt class="py-op">=</tt><tt class="py-string">"Unknown sequence type."</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L174"></a><tt class="py-lineno">174</tt>  <tt class="py-line">        <tt id="link-30" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-30', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'unit_name'</tt><tt class="py-op">,</tt> <tt class="py-string">'bits'</tt><tt class="py-op">,</tt>  </tt>
<a name="L175"></a><tt class="py-lineno">175</tt>  <tt class="py-line">            <tt class="py-name">options</tt><tt class="py-op">=</tt><tt class="py-op">[</tt> <tt class="py-string">'probability'</tt><tt class="py-op">,</tt> <tt class="py-string">'bits'</tt><tt class="py-op">,</tt> <tt class="py-string">'nats'</tt><tt class="py-op">,</tt> <tt class="py-string">'kT'</tt><tt class="py-op">,</tt> <tt class="py-string">'kJ/mol'</tt><tt class="py-op">,</tt>  </tt>
<a name="L176"></a><tt class="py-lineno">176</tt>  <tt class="py-line">                        <tt class="py-string">'kcal/mol'</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L177"></a><tt class="py-lineno">177</tt>  <tt class="py-line">        <tt id="link-31" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-31', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'first_index'</tt><tt class="py-op">,</tt> <tt class="py-number">1</tt><tt class="py-op">,</tt> <tt id="link-32" class="py-name" targets="Function weblogolib._cgi.int_or_none()=weblogolib._cgi-module.html#int_or_none"><a title="weblogolib._cgi.int_or_none" class="py-name" href="#" onclick="return doclink('link-32', 'int_or_none', 'link-32');">int_or_none</a></tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L178"></a><tt class="py-lineno">178</tt>  <tt class="py-line">        <tt id="link-33" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-33', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'logo_start'</tt><tt class="py-op">,</tt> <tt class="py-string">''</tt><tt class="py-op">,</tt> <tt id="link-34" class="py-name"><a title="weblogolib._cgi.int_or_none" class="py-name" href="#" onclick="return doclink('link-34', 'int_or_none', 'link-32');">int_or_none</a></tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L179"></a><tt class="py-lineno">179</tt>  <tt class="py-line">        <tt id="link-35" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-35', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'logo_end'</tt><tt class="py-op">,</tt> <tt class="py-string">''</tt><tt class="py-op">,</tt> <tt id="link-36" class="py-name"><a title="weblogolib._cgi.int_or_none" class="py-name" href="#" onclick="return doclink('link-36', 'int_or_none', 'link-32');">int_or_none</a></tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L180"></a><tt class="py-lineno">180</tt>  <tt class="py-line">        <tt id="link-37" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-37', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'composition'</tt><tt class="py-op">,</tt> <tt class="py-string">'comp_auto'</tt><tt class="py-op">,</tt> <tt id="link-38" class="py-name"><a title="weblogolib._cgi.composition" class="py-name" href="#" onclick="return doclink('link-38', 'composition', 'link-17');">composition</a></tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">,</tt> </tt>
<a name="L181"></a><tt class="py-lineno">181</tt>  <tt class="py-line">            <tt class="py-name">options</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'comp_none'</tt><tt class="py-op">,</tt><tt class="py-string">'comp_auto'</tt><tt class="py-op">,</tt><tt class="py-string">'comp_equiprobable'</tt><tt class="py-op">,</tt><tt class="py-string">'comp_CG'</tt><tt class="py-op">,</tt> </tt>
<a name="L182"></a><tt class="py-lineno">182</tt>  <tt class="py-line">            <tt class="py-string">'comp_Celegans'</tt><tt class="py-op">,</tt><tt class="py-string">'comp_Dmelanogaster'</tt><tt class="py-op">,</tt><tt class="py-string">'comp_Ecoli'</tt><tt class="py-op">,</tt> </tt>
<a name="L183"></a><tt class="py-lineno">183</tt>  <tt class="py-line">            <tt class="py-string">'comp_Hsapiens'</tt><tt class="py-op">,</tt><tt class="py-string">'comp_Mmusculus'</tt><tt class="py-op">,</tt><tt class="py-string">'comp_Scerevisiae'</tt><tt class="py-op">]</tt><tt class="py-op">,</tt>  </tt>
<a name="L184"></a><tt class="py-lineno">184</tt>  <tt class="py-line">            <tt class="py-name">errmsg</tt><tt class="py-op">=</tt> <tt class="py-string">"Illegal sequence composition."</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L185"></a><tt class="py-lineno">185</tt>  <tt class="py-line">        <tt id="link-39" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-39', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'percentCG'</tt><tt class="py-op">,</tt> <tt class="py-string">''</tt><tt class="py-op">,</tt> <tt id="link-40" class="py-name" targets="Function weblogolib._cgi.float_or_none()=weblogolib._cgi-module.html#float_or_none"><a title="weblogolib._cgi.float_or_none" class="py-name" href="#" onclick="return doclink('link-40', 'float_or_none', 'link-40');">float_or_none</a></tt><tt class="py-op">,</tt> <tt class="py-name">errmsg</tt><tt class="py-op">=</tt><tt class="py-string">"Invalid CG percentage."</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L186"></a><tt class="py-lineno">186</tt>  <tt class="py-line">        <tt id="link-41" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-41', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'show_errorbars'</tt><tt class="py-op">,</tt> <tt class="py-name">False</tt> <tt class="py-op">,</tt> <tt id="link-42" class="py-name" targets="Function weblogolib._cgi.truth()=weblogolib._cgi-module.html#truth"><a title="weblogolib._cgi.truth" class="py-name" href="#" onclick="return doclink('link-42', 'truth', 'link-42');">truth</a></tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L187"></a><tt class="py-lineno">187</tt>  <tt class="py-line">        <tt id="link-43" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-43', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'logo_title'</tt><tt class="py-op">,</tt> <tt class="py-name">logooptions</tt><tt class="py-op">.</tt><tt class="py-name">logo_title</tt> <tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L188"></a><tt class="py-lineno">188</tt>  <tt class="py-line">        <tt id="link-44" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-44', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'logo_label'</tt><tt class="py-op">,</tt> <tt class="py-name">logooptions</tt><tt class="py-op">.</tt><tt class="py-name">logo_label</tt> <tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L189"></a><tt class="py-lineno">189</tt>  <tt class="py-line">        <tt id="link-45" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-45', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'show_xaxis'</tt><tt class="py-op">,</tt> <tt class="py-name">False</tt><tt class="py-op">,</tt> <tt id="link-46" class="py-name"><a title="weblogolib._cgi.truth" class="py-name" href="#" onclick="return doclink('link-46', 'truth', 'link-42');">truth</a></tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L190"></a><tt class="py-lineno">190</tt>  <tt class="py-line">        <tt id="link-47" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-47', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'xaxis_label'</tt><tt class="py-op">,</tt> <tt class="py-name">logooptions</tt><tt class="py-op">.</tt><tt class="py-name">xaxis_label</tt> <tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L191"></a><tt class="py-lineno">191</tt>  <tt class="py-line">        <tt id="link-48" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-48', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'show_yaxis'</tt><tt class="py-op">,</tt> <tt class="py-name">False</tt><tt class="py-op">,</tt> <tt id="link-49" class="py-name"><a title="weblogolib._cgi.truth" class="py-name" href="#" onclick="return doclink('link-49', 'truth', 'link-42');">truth</a></tt><tt class="py-op">)</tt><tt class="py-op">,</tt>   </tt>
<a name="L192"></a><tt class="py-lineno">192</tt>  <tt class="py-line">        <tt id="link-50" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-50', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'yaxis_label'</tt><tt class="py-op">,</tt> <tt class="py-name">logooptions</tt><tt class="py-op">.</tt><tt class="py-name">yaxis_label</tt><tt class="py-op">,</tt> <tt id="link-51" class="py-name" targets="Function weblogolib._cgi.string_or_none()=weblogolib._cgi-module.html#string_or_none"><a title="weblogolib._cgi.string_or_none" class="py-name" href="#" onclick="return doclink('link-51', 'string_or_none', 'link-51');">string_or_none</a></tt> <tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L193"></a><tt class="py-lineno">193</tt>  <tt class="py-line">        <tt id="link-52" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-52', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'yaxis_scale'</tt><tt class="py-op">,</tt> <tt class="py-name">logooptions</tt><tt class="py-op">.</tt><tt class="py-name">yaxis_scale</tt> <tt class="py-op">,</tt> <tt id="link-53" class="py-name"><a title="weblogolib._cgi.float_or_none" class="py-name" href="#" onclick="return doclink('link-53', 'float_or_none', 'link-40');">float_or_none</a></tt><tt class="py-op">,</tt> </tt>
<a name="L194"></a><tt class="py-lineno">194</tt>  <tt class="py-line">            <tt class="py-name">errmsg</tt><tt class="py-op">=</tt><tt class="py-string">"The yaxis scale must be a positive number."</tt> <tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L195"></a><tt class="py-lineno">195</tt>  <tt class="py-line">        <tt id="link-54" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-54', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'yaxis_tic_interval'</tt><tt class="py-op">,</tt> <tt class="py-name">logooptions</tt><tt class="py-op">.</tt><tt class="py-name">yaxis_tic_interval</tt> <tt class="py-op">,</tt>  </tt>
<a name="L196"></a><tt class="py-lineno">196</tt>  <tt class="py-line">                <tt id="link-55" class="py-name"><a title="weblogolib._cgi.float_or_none" class="py-name" href="#" onclick="return doclink('link-55', 'float_or_none', 'link-40');">float_or_none</a></tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L197"></a><tt class="py-lineno">197</tt>  <tt class="py-line">        <tt id="link-56" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-56', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'show_ends'</tt><tt class="py-op">,</tt> <tt class="py-name">False</tt><tt class="py-op">,</tt> <tt id="link-57" class="py-name"><a title="weblogolib._cgi.truth" class="py-name" href="#" onclick="return doclink('link-57', 'truth', 'link-42');">truth</a></tt><tt class="py-op">)</tt><tt class="py-op">,</tt>  </tt>
<a name="L198"></a><tt class="py-lineno">198</tt>  <tt class="py-line">        <tt id="link-58" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-58', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'show_fineprint'</tt><tt class="py-op">,</tt> <tt class="py-name">False</tt> <tt class="py-op">,</tt> <tt id="link-59" class="py-name"><a title="weblogolib._cgi.truth" class="py-name" href="#" onclick="return doclink('link-59', 'truth', 'link-42');">truth</a></tt><tt class="py-op">)</tt><tt class="py-op">,</tt>  </tt>
<a name="L199"></a><tt class="py-lineno">199</tt>  <tt class="py-line">        <tt id="link-60" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-60', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'color_scheme'</tt><tt class="py-op">,</tt> <tt class="py-string">'color_auto'</tt><tt class="py-op">,</tt> <tt id="link-61" class="py-name"><a title="weblogolib._cgi.color_schemes" class="py-name" href="#" onclick="return doclink('link-61', 'color_schemes', 'link-11');">color_schemes</a></tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">,</tt> </tt>
<a name="L200"></a><tt class="py-lineno">200</tt>  <tt class="py-line">            <tt class="py-name">options</tt><tt class="py-op">=</tt><tt id="link-62" class="py-name"><a title="weblogolib._cgi.color_schemes" class="py-name" href="#" onclick="return doclink('link-62', 'color_schemes', 'link-11');">color_schemes</a></tt><tt class="py-op">.</tt><tt class="py-name">keys</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-op">,</tt> </tt>
<a name="L201"></a><tt class="py-lineno">201</tt>  <tt class="py-line">            <tt class="py-name">errmsg</tt> <tt class="py-op">=</tt> <tt class="py-string">'Unknown color scheme'</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L202"></a><tt class="py-lineno">202</tt>  <tt class="py-line">        <tt id="link-63" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-63', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'color0'</tt><tt class="py-op">,</tt> <tt class="py-string">''</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L203"></a><tt class="py-lineno">203</tt>  <tt class="py-line">        <tt id="link-64" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-64', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'symbols0'</tt><tt class="py-op">,</tt> <tt class="py-string">''</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L204"></a><tt class="py-lineno">204</tt>  <tt class="py-line">        <tt id="link-65" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-65', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'desc0'</tt><tt class="py-op">,</tt> <tt class="py-string">''</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L205"></a><tt class="py-lineno">205</tt>  <tt class="py-line">        <tt id="link-66" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-66', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'color1'</tt><tt class="py-op">,</tt> <tt class="py-string">''</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L206"></a><tt class="py-lineno">206</tt>  <tt class="py-line">        <tt id="link-67" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-67', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'symbols1'</tt><tt class="py-op">,</tt> <tt class="py-string">''</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L207"></a><tt class="py-lineno">207</tt>  <tt class="py-line">        <tt id="link-68" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-68', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'desc1'</tt><tt class="py-op">,</tt> <tt class="py-string">''</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L208"></a><tt class="py-lineno">208</tt>  <tt class="py-line">        <tt id="link-69" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-69', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'color2'</tt><tt class="py-op">,</tt> <tt class="py-string">''</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L209"></a><tt class="py-lineno">209</tt>  <tt class="py-line">        <tt id="link-70" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-70', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'symbols2'</tt><tt class="py-op">,</tt> <tt class="py-string">''</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L210"></a><tt class="py-lineno">210</tt>  <tt class="py-line">        <tt id="link-71" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-71', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'desc2'</tt><tt class="py-op">,</tt> <tt class="py-string">''</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L211"></a><tt class="py-lineno">211</tt>  <tt class="py-line">        <tt id="link-72" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-72', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'color3'</tt><tt class="py-op">,</tt> <tt class="py-string">''</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L212"></a><tt class="py-lineno">212</tt>  <tt class="py-line">        <tt id="link-73" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-73', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'symbols3'</tt><tt class="py-op">,</tt> <tt class="py-string">''</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L213"></a><tt class="py-lineno">213</tt>  <tt class="py-line">        <tt id="link-74" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-74', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'desc3'</tt><tt class="py-op">,</tt> <tt class="py-string">''</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L214"></a><tt class="py-lineno">214</tt>  <tt class="py-line">        <tt id="link-75" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-75', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'color4'</tt><tt class="py-op">,</tt> <tt class="py-string">''</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L215"></a><tt class="py-lineno">215</tt>  <tt class="py-line">        <tt id="link-76" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-76', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'symbols4'</tt><tt class="py-op">,</tt> <tt class="py-string">''</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L216"></a><tt class="py-lineno">216</tt>  <tt class="py-line">        <tt id="link-77" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-77', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'desc4'</tt><tt class="py-op">,</tt> <tt class="py-string">''</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L217"></a><tt class="py-lineno">217</tt>  <tt class="py-line">        <tt id="link-78" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-78', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'ignore_lower_case'</tt><tt class="py-op">,</tt> <tt class="py-name">False</tt><tt class="py-op">,</tt> <tt id="link-79" class="py-name"><a title="weblogolib._cgi.truth" class="py-name" href="#" onclick="return doclink('link-79', 'truth', 'link-42');">truth</a></tt><tt class="py-op">)</tt><tt class="py-op">,</tt>  </tt>
<a name="L218"></a><tt class="py-lineno">218</tt>  <tt class="py-line">        <tt id="link-80" class="py-name"><a title="weblogolib._cgi.Field" class="py-name" href="#" onclick="return doclink('link-80', 'Field', 'link-20');">Field</a></tt><tt class="py-op">(</tt> <tt class="py-string">'scale_width'</tt><tt class="py-op">,</tt> <tt class="py-name">False</tt><tt class="py-op">,</tt> <tt id="link-81" class="py-name"><a title="weblogolib._cgi.truth" class="py-name" href="#" onclick="return doclink('link-81', 'truth', 'link-42');">truth</a></tt><tt class="py-op">)</tt><tt class="py-op">,</tt>  </tt>
<a name="L219"></a><tt class="py-lineno">219</tt>  <tt class="py-line">        <tt class="py-op">]</tt> </tt>
<a name="L220"></a><tt class="py-lineno">220</tt>  <tt class="py-line">     </tt>
<a name="L221"></a><tt class="py-lineno">221</tt>  <tt class="py-line">    <tt class="py-name">form</tt> <tt class="py-op">=</tt> <tt class="py-op">{</tt><tt class="py-op">}</tt> </tt>
<a name="L222"></a><tt class="py-lineno">222</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">c</tt> <tt class="py-keyword">in</tt> <tt class="py-name">controls</tt> <tt class="py-op">:</tt> </tt>
<a name="L223"></a><tt class="py-lineno">223</tt>  <tt class="py-line">        <tt class="py-name">form</tt><tt class="py-op">[</tt><tt class="py-name">c</tt><tt class="py-op">.</tt><tt class="py-name">name</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">c</tt> </tt>
<a name="L224"></a><tt class="py-lineno">224</tt>  <tt class="py-line"> </tt>
<a name="L225"></a><tt class="py-lineno">225</tt>  <tt class="py-line"> </tt>
<a name="L226"></a><tt class="py-lineno">226</tt>  <tt class="py-line">    <tt class="py-name">form_values</tt> <tt class="py-op">=</tt> <tt class="py-name">cgilib</tt><tt class="py-op">.</tt><tt class="py-name">FieldStorage</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L227"></a><tt class="py-lineno">227</tt>  <tt class="py-line">     </tt>
<a name="L228"></a><tt class="py-lineno">228</tt>  <tt class="py-line">    <tt class="py-comment"># Send default form?</tt> </tt>
<a name="L229"></a><tt class="py-lineno">229</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">if</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">form_values</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt><tt class="py-number">0</tt> <tt class="py-keyword">or</tt> <tt class="py-name">form_values</tt><tt class="py-op">.</tt><tt class="py-name">has_key</tt><tt class="py-op">(</tt><tt class="py-string">"cmd_reset"</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L230"></a><tt class="py-lineno">230</tt>  <tt class="py-line">        <tt class="py-comment"># Load default truth values now.</tt> </tt>
<a name="L231"></a><tt class="py-lineno">231</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-name">form</tt><tt class="py-op">[</tt><tt class="py-string">'show_errorbars'</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt class="py-name">value</tt> <tt class="py-op">=</tt> <tt class="py-name">logooptions</tt><tt class="py-op">.</tt><tt class="py-name">show_errorbars</tt> </tt>
<a name="L232"></a><tt class="py-lineno">232</tt>  <tt class="py-line">        <tt class="py-name">form</tt><tt class="py-op">[</tt><tt class="py-string">'show_xaxis'</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt class="py-name">value</tt> <tt class="py-op">=</tt> <tt class="py-name">logooptions</tt><tt class="py-op">.</tt><tt class="py-name">show_xaxis</tt> </tt>
<a name="L233"></a><tt class="py-lineno">233</tt>  <tt class="py-line">        <tt class="py-name">form</tt><tt class="py-op">[</tt><tt class="py-string">'show_yaxis'</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt class="py-name">value</tt> <tt class="py-op">=</tt> <tt class="py-name">logooptions</tt><tt class="py-op">.</tt><tt class="py-name">show_yaxis</tt> </tt>
<a name="L234"></a><tt class="py-lineno">234</tt>  <tt class="py-line">        <tt class="py-name">form</tt><tt class="py-op">[</tt><tt class="py-string">'show_ends'</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt class="py-name">value</tt> <tt class="py-op">=</tt> <tt class="py-name">logooptions</tt><tt class="py-op">.</tt><tt class="py-name">show_ends</tt> </tt>
<a name="L235"></a><tt class="py-lineno">235</tt>  <tt class="py-line">        <tt class="py-name">form</tt><tt class="py-op">[</tt><tt class="py-string">'show_fineprint'</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt class="py-name">value</tt> <tt class="py-op">=</tt> <tt class="py-name">logooptions</tt><tt class="py-op">.</tt><tt class="py-name">show_fineprint</tt> </tt>
<a name="L236"></a><tt class="py-lineno">236</tt>  <tt class="py-line">        <tt class="py-name">form</tt><tt class="py-op">[</tt><tt class="py-string">'scale_width'</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt class="py-name">value</tt> <tt class="py-op">=</tt> <tt class="py-name">logooptions</tt><tt class="py-op">.</tt><tt class="py-name">scale_width</tt> </tt>
<a name="L237"></a><tt class="py-lineno">237</tt>  <tt class="py-line">         </tt>
<a name="L238"></a><tt class="py-lineno">238</tt>  <tt class="py-line">        <tt id="link-82" class="py-name" targets="Function weblogolib._cgi.send_form()=weblogolib._cgi-module.html#send_form"><a title="weblogolib._cgi.send_form" class="py-name" href="#" onclick="return doclink('link-82', 'send_form', 'link-82');">send_form</a></tt><tt class="py-op">(</tt><tt class="py-name">controls</tt><tt class="py-op">,</tt> <tt class="py-name">htdocs_directory</tt> <tt class="py-op">=</tt> <tt class="py-name">htdocs_directory</tt><tt class="py-op">)</tt>  </tt>
<a name="L239"></a><tt class="py-lineno">239</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> </tt>
<a name="L240"></a><tt class="py-lineno">240</tt>  <tt class="py-line">     </tt>
<a name="L241"></a><tt class="py-lineno">241</tt>  <tt class="py-line">    <tt class="py-comment"># Get form content</tt> </tt>
<a name="L242"></a><tt class="py-lineno">242</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">for</tt> <tt class="py-name">c</tt> <tt class="py-keyword">in</tt> <tt class="py-name">controls</tt> <tt class="py-op">:</tt> </tt>
<a name="L243"></a><tt class="py-lineno">243</tt>  <tt class="py-line">        <tt class="py-name">c</tt><tt class="py-op">.</tt><tt class="py-name">value</tt> <tt class="py-op">=</tt> <tt class="py-name">form_values</tt><tt class="py-op">.</tt><tt class="py-name">getfirst</tt><tt class="py-op">(</tt> <tt class="py-name">c</tt><tt class="py-op">.</tt><tt class="py-name">name</tt><tt class="py-op">,</tt> <tt class="py-name">c</tt><tt class="py-op">.</tt><tt class="py-name">default</tt><tt class="py-op">)</tt>  </tt>
<a name="L244"></a><tt class="py-lineno">244</tt>  <tt class="py-line">        </tt>
<a name="L245"></a><tt class="py-lineno">245</tt>  <tt class="py-line">        </tt>
<a name="L246"></a><tt class="py-lineno">246</tt>  <tt class="py-line">    <tt class="py-name">options_from_form</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-string">'format'</tt><tt class="py-op">,</tt> <tt class="py-string">'stacks_per_line'</tt><tt class="py-op">,</tt> <tt class="py-string">'stack_width'</tt><tt class="py-op">,</tt>  </tt>
<a name="L247"></a><tt class="py-lineno">247</tt>  <tt class="py-line">        <tt class="py-string">'alphabet'</tt><tt class="py-op">,</tt> <tt class="py-string">'unit_name'</tt><tt class="py-op">,</tt> <tt class="py-string">'first_index'</tt><tt class="py-op">,</tt> <tt class="py-string">'logo_start'</tt><tt class="py-op">,</tt><tt class="py-string">'logo_end'</tt><tt class="py-op">,</tt> </tt>
<a name="L248"></a><tt class="py-lineno">248</tt>  <tt class="py-line">         <tt class="py-string">'composition'</tt><tt class="py-op">,</tt>  </tt>
<a name="L249"></a><tt class="py-lineno">249</tt>  <tt class="py-line">        <tt class="py-string">'show_errorbars'</tt><tt class="py-op">,</tt> <tt class="py-string">'logo_title'</tt><tt class="py-op">,</tt> <tt class="py-string">'logo_label'</tt><tt class="py-op">,</tt> <tt class="py-string">'show_xaxis'</tt><tt class="py-op">,</tt>  </tt>
<a name="L250"></a><tt class="py-lineno">250</tt>  <tt class="py-line">        <tt class="py-string">'xaxis_label'</tt><tt class="py-op">,</tt> </tt>
<a name="L251"></a><tt class="py-lineno">251</tt>  <tt class="py-line">        <tt class="py-string">'show_yaxis'</tt><tt class="py-op">,</tt> <tt class="py-string">'yaxis_label'</tt><tt class="py-op">,</tt> <tt class="py-string">'yaxis_scale'</tt><tt class="py-op">,</tt> <tt class="py-string">'yaxis_tic_interval'</tt><tt class="py-op">,</tt> </tt>
<a name="L252"></a><tt class="py-lineno">252</tt>  <tt class="py-line">        <tt class="py-string">'show_ends'</tt><tt class="py-op">,</tt> <tt class="py-string">'show_fineprint'</tt><tt class="py-op">,</tt> <tt class="py-string">'scale_width'</tt><tt class="py-op">]</tt> </tt>
<a name="L253"></a><tt class="py-lineno">253</tt>  <tt class="py-line">     </tt>
<a name="L254"></a><tt class="py-lineno">254</tt>  <tt class="py-line">     </tt>
<a name="L255"></a><tt class="py-lineno">255</tt>  <tt class="py-line">    <tt class="py-name">errors</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L256"></a><tt class="py-lineno">256</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">optname</tt> <tt class="py-keyword">in</tt> <tt class="py-name">options_from_form</tt> <tt class="py-op">:</tt> </tt>
<a name="L257"></a><tt class="py-lineno">257</tt>  <tt class="py-line">        <tt class="py-keyword">try</tt> <tt class="py-op">:</tt> </tt>
<a name="L258"></a><tt class="py-lineno">258</tt>  <tt class="py-line">            <tt class="py-name">value</tt> <tt class="py-op">=</tt>  <tt class="py-name">form</tt><tt class="py-op">[</tt><tt class="py-name">optname</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt id="link-83" class="py-name" targets="Method weblogolib._cgi.Field.get_value()=weblogolib._cgi.Field-class.html#get_value"><a title="weblogolib._cgi.Field.get_value" class="py-name" href="#" onclick="return doclink('link-83', 'get_value', 'link-83');">get_value</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L259"></a><tt class="py-lineno">259</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">value</tt><tt class="py-op">!=</tt><tt class="py-name">None</tt> <tt class="py-op">:</tt> <tt class="py-name">setattr</tt><tt class="py-op">(</tt><tt class="py-name">logooptions</tt><tt class="py-op">,</tt> <tt class="py-name">optname</tt><tt class="py-op">,</tt> <tt class="py-name">value</tt><tt class="py-op">)</tt> </tt>
<a name="L260"></a><tt class="py-lineno">260</tt>  <tt class="py-line">        <tt class="py-keyword">except</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-name">err</tt> <tt class="py-op">:</tt> </tt>
<a name="L261"></a><tt class="py-lineno">261</tt>  <tt class="py-line">            <tt class="py-name">errors</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">err</tt><tt class="py-op">.</tt><tt class="py-name">args</tt><tt class="py-op">)</tt>             </tt>
<a name="L262"></a><tt class="py-lineno">262</tt>  <tt class="py-line"> </tt>
<a name="L263"></a><tt class="py-lineno">263</tt>  <tt class="py-line">     </tt>
<a name="L264"></a><tt class="py-lineno">264</tt>  <tt class="py-line">    <tt class="py-comment"># Construct custom color scheme</tt> </tt>
<a name="L265"></a><tt class="py-lineno">265</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">custom</tt> <tt class="py-op">=</tt> <tt id="link-84" class="py-name"><a title="weblogolib.colorscheme.ColorScheme" class="py-name" href="#" onclick="return doclink('link-84', 'ColorScheme', 'link-2');">ColorScheme</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L266"></a><tt class="py-lineno">266</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">range</tt><tt class="py-op">(</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">5</tt><tt class="py-op">)</tt> <tt class="py-op">:</tt> </tt>
<a name="L267"></a><tt class="py-lineno">267</tt>  <tt class="py-line">        <tt id="link-85" class="py-name"><a title="weblogolib.color
weblogolib.colorscheme.ColorScheme.color" class="py-name" href="#" onclick="return doclink('link-85', 'color', 'link-0');">color</a></tt> <tt class="py-op">=</tt> <tt class="py-name">form</tt><tt class="py-op">[</tt><tt class="py-string">"color%d"</tt><tt class="py-op">%</tt><tt class="py-name">i</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt id="link-86" class="py-name"><a title="weblogolib._cgi.Field.get_value" class="py-name" href="#" onclick="return doclink('link-86', 'get_value', 'link-83');">get_value</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L268"></a><tt class="py-lineno">268</tt>  <tt class="py-line">        <tt class="py-name">symbols</tt> <tt class="py-op">=</tt> <tt class="py-name">form</tt><tt class="py-op">[</tt><tt class="py-string">"symbols%d"</tt><tt class="py-op">%</tt><tt class="py-name">i</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt id="link-87" class="py-name"><a title="weblogolib._cgi.Field.get_value" class="py-name" href="#" onclick="return doclink('link-87', 'get_value', 'link-83');">get_value</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L269"></a><tt class="py-lineno">269</tt>  <tt class="py-line">        <tt class="py-name">desc</tt> <tt class="py-op">=</tt> <tt class="py-name">form</tt><tt class="py-op">[</tt><tt class="py-string">"desc%d"</tt><tt class="py-op">%</tt><tt class="py-name">i</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt id="link-88" class="py-name"><a title="weblogolib._cgi.Field.get_value" class="py-name" href="#" onclick="return doclink('link-88', 'get_value', 'link-83');">get_value</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt>  </tt>
<a name="L270"></a><tt class="py-lineno">270</tt>  <tt class="py-line"> </tt>
<a name="L271"></a><tt class="py-lineno">271</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt id="link-89" class="py-name"><a title="weblogolib.color
weblogolib.colorscheme.ColorScheme.color" class="py-name" href="#" onclick="return doclink('link-89', 'color', 'link-0');">color</a></tt> <tt class="py-op">:</tt> </tt>
<a name="L272"></a><tt class="py-lineno">272</tt>  <tt class="py-line">            <tt class="py-keyword">try</tt> <tt class="py-op">:</tt> </tt>
<a name="L273"></a><tt class="py-lineno">273</tt>  <tt class="py-line">                <tt class="py-name">custom</tt><tt class="py-op">.</tt><tt class="py-name">groups</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt id="link-90" class="py-name"><a title="weblogolib" class="py-name" href="#" onclick="return doclink('link-90', 'weblogolib', 'link-4');">weblogolib</a></tt><tt class="py-op">.</tt><tt id="link-91" class="py-name"><a title="weblogolib.colorscheme.ColorGroup" class="py-name" href="#" onclick="return doclink('link-91', 'ColorGroup', 'link-3');">ColorGroup</a></tt><tt class="py-op">(</tt><tt class="py-name">symbols</tt><tt class="py-op">,</tt> <tt id="link-92" class="py-name"><a title="weblogolib.color
weblogolib.colorscheme.ColorScheme.color" class="py-name" href="#" onclick="return doclink('link-92', 'color', 'link-0');">color</a></tt><tt class="py-op">,</tt> <tt class="py-name">desc</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L274"></a><tt class="py-lineno">274</tt>  <tt class="py-line">            <tt class="py-keyword">except</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-name">e</tt> <tt class="py-op">:</tt>  </tt>
<a name="L275"></a><tt class="py-lineno">275</tt>  <tt class="py-line">                <tt class="py-name">errors</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt> <tt class="py-op">(</tt><tt class="py-string">'color%d'</tt><tt class="py-op">%</tt><tt class="py-name">i</tt><tt class="py-op">,</tt> <tt class="py-string">"Invalid color: %s"</tt> <tt class="py-op">%</tt> <tt id="link-93" class="py-name"><a title="weblogolib.color
weblogolib.colorscheme.ColorScheme.color" class="py-name" href="#" onclick="return doclink('link-93', 'color', 'link-0');">color</a></tt><tt class="py-op">)</tt> <tt class="py-op">)</tt> </tt>
<a name="L276"></a><tt class="py-lineno">276</tt>  <tt class="py-line">     </tt>
<a name="L277"></a><tt class="py-lineno">277</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">form</tt><tt class="py-op">[</tt><tt class="py-string">"color_scheme"</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt class="py-name">value</tt> <tt class="py-op">==</tt> <tt class="py-string">'color_custom'</tt> <tt class="py-op">:</tt> </tt>
<a name="L278"></a><tt class="py-lineno">278</tt>  <tt class="py-line">        <tt class="py-name">logooptions</tt><tt class="py-op">.</tt><tt class="py-name">color_scheme</tt> <tt class="py-op">=</tt>  <tt class="py-name">custom</tt> </tt>
<a name="L279"></a><tt class="py-lineno">279</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt> <tt class="py-op">:</tt> </tt>
<a name="L280"></a><tt class="py-lineno">280</tt>  <tt class="py-line">        <tt class="py-keyword">try</tt> <tt class="py-op">:</tt> </tt>
<a name="L281"></a><tt class="py-lineno">281</tt>  <tt class="py-line">            <tt class="py-name">logooptions</tt><tt class="py-op">.</tt><tt class="py-name">color_scheme</tt> <tt class="py-op">=</tt> <tt class="py-name">form</tt><tt class="py-op">[</tt><tt class="py-string">"color_scheme"</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt id="link-94" class="py-name"><a title="weblogolib._cgi.Field.get_value" class="py-name" href="#" onclick="return doclink('link-94', 'get_value', 'link-83');">get_value</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L282"></a><tt class="py-lineno">282</tt>  <tt class="py-line">        <tt class="py-keyword">except</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-name">err</tt> <tt class="py-op">:</tt> </tt>
<a name="L283"></a><tt class="py-lineno">283</tt>  <tt class="py-line">            <tt class="py-name">errors</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">err</tt><tt class="py-op">.</tt><tt class="py-name">args</tt><tt class="py-op">)</tt>             </tt>
<a name="L284"></a><tt class="py-lineno">284</tt>  <tt class="py-line"> </tt>
<a name="L285"></a><tt class="py-lineno">285</tt>  <tt class="py-line">    <tt class="py-name">sequences</tt> <tt class="py-op">=</tt> <tt class="py-name">None</tt> </tt>
<a name="L286"></a><tt class="py-lineno">286</tt>  <tt class="py-line"> </tt>
<a name="L287"></a><tt class="py-lineno">287</tt>  <tt class="py-line">    <tt class="py-comment"># FIXME: Ugly fix: Must check that sequence_file key exists</tt> </tt>
<a name="L288"></a><tt class="py-lineno">288</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># FIXME: Sending malformed or missing form keys should not cause a crash</tt> </tt>
<a name="L289"></a><tt class="py-lineno">289</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># sequences_file = form["sequences_file"]</tt> </tt>
<a name="L290"></a><tt class="py-lineno">290</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">if</tt> <tt class="py-name">form_values</tt><tt class="py-op">.</tt><tt class="py-name">has_key</tt><tt class="py-op">(</tt><tt class="py-string">"sequences_file"</tt><tt class="py-op">)</tt> <tt class="py-op">:</tt> </tt>
<a name="L291"></a><tt class="py-lineno">291</tt>  <tt class="py-line">        <tt class="py-name">sequences</tt> <tt class="py-op">=</tt> <tt class="py-name">form_values</tt><tt class="py-op">.</tt><tt class="py-name">getvalue</tt><tt class="py-op">(</tt><tt class="py-string">"sequences_file"</tt><tt class="py-op">)</tt>  </tt>
<a name="L292"></a><tt class="py-lineno">292</tt>  <tt class="py-line">        <tt class="py-keyword">assert</tt> <tt class="py-name">type</tt><tt class="py-op">(</tt><tt class="py-name">sequences</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-name">str</tt> </tt>
<a name="L293"></a><tt class="py-lineno">293</tt>  <tt class="py-line"> </tt>
<a name="L294"></a><tt class="py-lineno">294</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">sequences</tt> <tt class="py-keyword">or</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">sequences</tt><tt class="py-op">)</tt>  <tt class="py-op">==</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L295"></a><tt class="py-lineno">295</tt>  <tt class="py-line">        <tt class="py-name">sequences</tt> <tt class="py-op">=</tt> <tt class="py-name">form</tt><tt class="py-op">[</tt><tt class="py-string">"sequences"</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt id="link-95" class="py-name"><a title="weblogolib._cgi.Field.get_value" class="py-name" href="#" onclick="return doclink('link-95', 'get_value', 'link-83');">get_value</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L296"></a><tt class="py-lineno">296</tt>  <tt class="py-line">     </tt>
<a name="L297"></a><tt class="py-lineno">297</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">sequences</tt> <tt class="py-keyword">or</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">sequences</tt><tt class="py-op">)</tt>  <tt class="py-op">==</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L298"></a><tt class="py-lineno">298</tt>  <tt class="py-line">        <tt class="py-name">errors</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt> <tt class="py-op">(</tt><tt class="py-string">"sequences"</tt><tt class="py-op">,</tt> <tt class="py-string">"Please enter a multiple-sequence alignment in the box above, or select a file to upload."</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L299"></a><tt class="py-lineno">299</tt>  <tt class="py-line">   </tt>
<a name="L300"></a><tt class="py-lineno">300</tt>  <tt class="py-line"> </tt>
<a name="L301"></a><tt class="py-lineno">301</tt>  <tt class="py-line"> </tt>
<a name="L302"></a><tt class="py-lineno">302</tt>  <tt class="py-line">    <tt class="py-comment"># If we have uncovered errors or we want the chance to edit the logo </tt> </tt>
<a name="L303"></a><tt class="py-lineno">303</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># ("cmd_edit" command from examples page) then we return the form now.</tt> </tt>
<a name="L304"></a><tt class="py-lineno">304</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># We do not proceed to the time consuming logo creation step unless</tt> </tt>
<a name="L305"></a><tt class="py-lineno">305</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># required by a 'create' or 'validate' command, and no errors have been</tt> </tt>
<a name="L306"></a><tt class="py-lineno">306</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># found yet.</tt> </tt>
<a name="L307"></a><tt class="py-lineno">307</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">if</tt> <tt class="py-name">form_values</tt><tt class="py-op">.</tt><tt class="py-name">has_key</tt><tt class="py-op">(</tt><tt class="py-string">"cmd_edit"</tt><tt class="py-op">)</tt> <tt class="py-keyword">or</tt> <tt class="py-name">errors</tt> <tt class="py-op">:</tt> </tt>
<a name="L308"></a><tt class="py-lineno">308</tt>  <tt class="py-line">        <tt id="link-96" class="py-name"><a title="weblogolib._cgi.send_form" class="py-name" href="#" onclick="return doclink('link-96', 'send_form', 'link-82');">send_form</a></tt><tt class="py-op">(</tt><tt class="py-name">controls</tt><tt class="py-op">,</tt> <tt class="py-name">errors</tt><tt class="py-op">,</tt> <tt class="py-name">htdocs_directory</tt><tt class="py-op">)</tt> </tt>
<a name="L309"></a><tt class="py-lineno">309</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt>     </tt>
<a name="L310"></a><tt class="py-lineno">310</tt>  <tt class="py-line">  </tt>
<a name="L311"></a><tt class="py-lineno">311</tt>  <tt class="py-line">    <tt class="py-comment"># We write the logo into a local buffer so that we can catch and</tt> </tt>
<a name="L312"></a><tt class="py-lineno">312</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># handle any errors. Once the "Content-Type:" header has been sent</tt> </tt>
<a name="L313"></a><tt class="py-lineno">313</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># we can't send any useful feedback</tt> </tt>
<a name="L314"></a><tt class="py-lineno">314</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">logo</tt> <tt class="py-op">=</tt> <tt class="py-name">StringIO</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L315"></a><tt class="py-lineno">315</tt>  <tt class="py-line">    <tt class="py-keyword">try</tt> <tt class="py-op">:</tt> </tt>
<a name="L316"></a><tt class="py-lineno">316</tt>  <tt class="py-line">        <tt class="py-name">comp</tt> <tt class="py-op">=</tt> <tt class="py-name">form</tt><tt class="py-op">[</tt><tt class="py-string">"composition"</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt id="link-97" class="py-name"><a title="weblogolib._cgi.Field.get_value" class="py-name" href="#" onclick="return doclink('link-97', 'get_value', 'link-83');">get_value</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L317"></a><tt class="py-lineno">317</tt>  <tt class="py-line">        <tt class="py-name">percentCG</tt> <tt class="py-op">=</tt> <tt class="py-name">form</tt><tt class="py-op">[</tt><tt class="py-string">"percentCG"</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt id="link-98" class="py-name"><a title="weblogolib._cgi.Field.get_value" class="py-name" href="#" onclick="return doclink('link-98', 'get_value', 'link-83');">get_value</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L318"></a><tt class="py-lineno">318</tt>  <tt class="py-line">        <tt class="py-name">ignore_lower_case</tt> <tt class="py-op">=</tt> <tt class="py-name">form_values</tt><tt class="py-op">.</tt><tt class="py-name">has_key</tt><tt class="py-op">(</tt><tt class="py-string">"ignore_lower_case"</tt><tt class="py-op">)</tt>  </tt>
<a name="L319"></a><tt class="py-lineno">319</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">comp</tt><tt class="py-op">==</tt><tt class="py-string">'percentCG'</tt><tt class="py-op">:</tt> <tt class="py-name">comp</tt> <tt class="py-op">=</tt> <tt class="py-name">str</tt><tt class="py-op">(</tt><tt class="py-name">percentCG</tt><tt class="py-op">/</tt><tt class="py-number">100</tt><tt class="py-op">)</tt>      </tt>
<a name="L320"></a><tt class="py-lineno">320</tt>  <tt class="py-line">         </tt>
<a name="L321"></a><tt class="py-lineno">321</tt>  <tt class="py-line">        <tt class="py-keyword">from</tt> <tt class="py-name">corebio</tt><tt class="py-op">.</tt><tt class="py-name">matrix</tt> <tt class="py-keyword">import</tt> <tt class="py-name">Motif</tt> </tt>
<a name="L322"></a><tt class="py-lineno">322</tt>  <tt class="py-line">          </tt>
<a name="L323"></a><tt class="py-lineno">323</tt>  <tt class="py-line">        <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L324"></a><tt class="py-lineno">324</tt>  <tt class="py-line">            <tt class="py-comment"># Try reading data in transfac format first. </tt> </tt>
<a name="L325"></a><tt class="py-lineno">325</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-comment"># TODO Refactor this code </tt> </tt>
<a name="L326"></a><tt class="py-lineno">326</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-name">motif</tt> <tt class="py-op">=</tt> <tt class="py-name">Motif</tt><tt class="py-op">.</tt><tt class="py-name">read_transfac</tt><tt class="py-op">(</tt><tt class="py-name">StringIO</tt><tt class="py-op">(</tt> <tt class="py-name">sequences</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">alphabet</tt><tt class="py-op">=</tt><tt class="py-name">logooptions</tt><tt class="py-op">.</tt><tt class="py-name">alphabet</tt><tt class="py-op">)</tt> </tt>
<a name="L327"></a><tt class="py-lineno">327</tt>  <tt class="py-line">            <tt class="py-name">prior</tt> <tt class="py-op">=</tt> <tt id="link-99" class="py-name"><a title="weblogolib" class="py-name" href="#" onclick="return doclink('link-99', 'weblogolib', 'link-4');">weblogolib</a></tt><tt class="py-op">.</tt><tt class="py-name">parse_prior</tt><tt class="py-op">(</tt> <tt class="py-name">comp</tt><tt class="py-op">,</tt><tt class="py-name">motif</tt><tt class="py-op">.</tt><tt class="py-name">alphabet</tt><tt class="py-op">)</tt>   </tt>
<a name="L328"></a><tt class="py-lineno">328</tt>  <tt class="py-line">            <tt class="py-name">data</tt> <tt class="py-op">=</tt> <tt id="link-100" class="py-name"><a title="weblogolib" class="py-name" href="#" onclick="return doclink('link-100', 'weblogolib', 'link-4');">weblogolib</a></tt><tt class="py-op">.</tt><tt id="link-101" class="py-name" targets="Class weblogolib.LogoData=weblogolib.LogoData-class.html"><a title="weblogolib.LogoData" class="py-name" href="#" onclick="return doclink('link-101', 'LogoData', 'link-101');">LogoData</a></tt><tt class="py-op">.</tt><tt id="link-102" class="py-name" targets="Class Method weblogolib.LogoData.from_counts()=weblogolib.LogoData-class.html#from_counts"><a title="weblogolib.LogoData.from_counts" class="py-name" href="#" onclick="return doclink('link-102', 'from_counts', 'link-102');">from_counts</a></tt><tt class="py-op">(</tt><tt class="py-name">motif</tt><tt class="py-op">.</tt><tt class="py-name">alphabet</tt><tt class="py-op">,</tt> <tt class="py-name">motif</tt><tt class="py-op">,</tt> <tt class="py-name">prior</tt><tt class="py-op">)</tt>           </tt>
<a name="L329"></a><tt class="py-lineno">329</tt>  <tt class="py-line">        <tt class="py-keyword">except</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-name">motif_err</tt> <tt class="py-op">:</tt> </tt>
<a name="L330"></a><tt class="py-lineno">330</tt>  <tt class="py-line">            <tt class="py-name">seqs</tt> <tt class="py-op">=</tt> <tt id="link-103" class="py-name"><a title="weblogolib" class="py-name" href="#" onclick="return doclink('link-103', 'weblogolib', 'link-4');">weblogolib</a></tt><tt class="py-op">.</tt><tt id="link-104" class="py-name" targets="Function weblogolib.read_seq_data()=weblogolib-module.html#read_seq_data"><a title="weblogolib.read_seq_data" class="py-name" href="#" onclick="return doclink('link-104', 'read_seq_data', 'link-104');">read_seq_data</a></tt><tt class="py-op">(</tt><tt class="py-name">StringIO</tt><tt class="py-op">(</tt> <tt class="py-name">sequences</tt><tt class="py-op">)</tt><tt class="py-op">,</tt>  </tt>
<a name="L331"></a><tt class="py-lineno">331</tt>  <tt class="py-line">                                        <tt class="py-name">alphabet</tt><tt class="py-op">=</tt><tt class="py-name">logooptions</tt><tt class="py-op">.</tt><tt class="py-name">alphabet</tt><tt class="py-op">,</tt> </tt>
<a name="L332"></a><tt class="py-lineno">332</tt>  <tt class="py-line">                                        <tt class="py-name">ignore_lower_case</tt><tt class="py-op">=</tt><tt class="py-name">ignore_lower_case</tt> </tt>
<a name="L333"></a><tt class="py-lineno">333</tt>  <tt class="py-line">                                        <tt class="py-op">)</tt> </tt>
<a name="L334"></a><tt class="py-lineno">334</tt>  <tt class="py-line">            <tt class="py-name">prior</tt> <tt class="py-op">=</tt> <tt id="link-105" class="py-name"><a title="weblogolib" class="py-name" href="#" onclick="return doclink('link-105', 'weblogolib', 'link-4');">weblogolib</a></tt><tt class="py-op">.</tt><tt class="py-name">parse_prior</tt><tt class="py-op">(</tt><tt class="py-name">comp</tt><tt class="py-op">,</tt> <tt class="py-name">seqs</tt><tt class="py-op">.</tt><tt class="py-name">alphabet</tt><tt class="py-op">)</tt>                         </tt>
<a name="L335"></a><tt class="py-lineno">335</tt>  <tt class="py-line">            <tt class="py-name">data</tt> <tt class="py-op">=</tt> <tt id="link-106" class="py-name"><a title="weblogolib" class="py-name" href="#" onclick="return doclink('link-106', 'weblogolib', 'link-4');">weblogolib</a></tt><tt class="py-op">.</tt><tt id="link-107" class="py-name"><a title="weblogolib.LogoData" class="py-name" href="#" onclick="return doclink('link-107', 'LogoData', 'link-101');">LogoData</a></tt><tt class="py-op">.</tt><tt id="link-108" class="py-name" targets="Class Method weblogolib.LogoData.from_seqs()=weblogolib.LogoData-class.html#from_seqs"><a title="weblogolib.LogoData.from_seqs" class="py-name" href="#" onclick="return doclink('link-108', 'from_seqs', 'link-108');">from_seqs</a></tt><tt class="py-op">(</tt><tt class="py-name">seqs</tt><tt class="py-op">,</tt> <tt class="py-name">prior</tt><tt class="py-op">)</tt>  </tt>
<a name="L336"></a><tt class="py-lineno">336</tt>  <tt class="py-line">             </tt>
<a name="L337"></a><tt class="py-lineno">337</tt>  <tt class="py-line">        <tt class="py-name">logoformat</tt> <tt class="py-op">=</tt>  <tt id="link-109" class="py-name"><a title="weblogolib" class="py-name" href="#" onclick="return doclink('link-109', 'weblogolib', 'link-4');">weblogolib</a></tt><tt class="py-op">.</tt><tt id="link-110" class="py-name" targets="Class weblogolib.LogoFormat=weblogolib.LogoFormat-class.html"><a title="weblogolib.LogoFormat" class="py-name" href="#" onclick="return doclink('link-110', 'LogoFormat', 'link-110');">LogoFormat</a></tt><tt class="py-op">(</tt><tt class="py-name">data</tt><tt class="py-op">,</tt> <tt class="py-name">logooptions</tt><tt class="py-op">)</tt> </tt>
<a name="L338"></a><tt class="py-lineno">338</tt>  <tt class="py-line">        <tt class="py-name">format</tt> <tt class="py-op">=</tt> <tt class="py-name">form</tt><tt class="py-op">[</tt><tt class="py-string">"format"</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt class="py-name">value</tt> </tt>
<a name="L339"></a><tt class="py-lineno">339</tt>  <tt class="py-line">        <tt id="link-111" class="py-name"><a title="weblogolib" class="py-name" href="#" onclick="return doclink('link-111', 'weblogolib', 'link-4');">weblogolib</a></tt><tt class="py-op">.</tt><tt id="link-112" class="py-name"><a title="weblogolib.formatters" class="py-name" href="#" onclick="return doclink('link-112', 'formatters', 'link-23');">formatters</a></tt><tt class="py-op">[</tt><tt class="py-name">format</tt><tt class="py-op">]</tt><tt class="py-op">(</tt><tt class="py-name">data</tt><tt class="py-op">,</tt> <tt class="py-name">logoformat</tt><tt class="py-op">,</tt> <tt class="py-name">logo</tt><tt class="py-op">)</tt>             </tt>
<a name="L340"></a><tt class="py-lineno">340</tt>  <tt class="py-line">    <tt class="py-keyword">except</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-name">err</tt> <tt class="py-op">:</tt> </tt>
<a name="L341"></a><tt class="py-lineno">341</tt>  <tt class="py-line">        <tt class="py-name">errors</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt> <tt class="py-name">err</tt><tt class="py-op">.</tt><tt class="py-name">args</tt> <tt class="py-op">)</tt> </tt>
<a name="L342"></a><tt class="py-lineno">342</tt>  <tt class="py-line">    <tt class="py-keyword">except</tt> <tt class="py-name">IOError</tt><tt class="py-op">,</tt> <tt class="py-name">err</tt> <tt class="py-op">:</tt> </tt>
<a name="L343"></a><tt class="py-lineno">343</tt>  <tt class="py-line">        <tt class="py-name">errors</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt> <tt class="py-name">err</tt><tt class="py-op">.</tt><tt class="py-name">args</tt><tt class="py-op">)</tt> </tt>
<a name="L344"></a><tt class="py-lineno">344</tt>  <tt class="py-line">    <tt class="py-keyword">except</tt> <tt class="py-name">RuntimeError</tt><tt class="py-op">,</tt> <tt class="py-name">err</tt> <tt class="py-op">:</tt> </tt>
<a name="L345"></a><tt class="py-lineno">345</tt>  <tt class="py-line">        <tt class="py-name">errors</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt> <tt class="py-name">err</tt><tt class="py-op">.</tt><tt class="py-name">args</tt> <tt class="py-op">)</tt> </tt>
<a name="L346"></a><tt class="py-lineno">346</tt>  <tt class="py-line">               </tt>
<a name="L347"></a><tt class="py-lineno">347</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">form_values</tt><tt class="py-op">.</tt><tt class="py-name">has_key</tt><tt class="py-op">(</tt><tt class="py-string">"cmd_validate"</tt><tt class="py-op">)</tt> <tt class="py-keyword">or</tt> <tt class="py-name">errors</tt> <tt class="py-op">:</tt> </tt>
<a name="L348"></a><tt class="py-lineno">348</tt>  <tt class="py-line">        <tt id="link-113" class="py-name"><a title="weblogolib._cgi.send_form" class="py-name" href="#" onclick="return doclink('link-113', 'send_form', 'link-82');">send_form</a></tt><tt class="py-op">(</tt><tt class="py-name">controls</tt><tt class="py-op">,</tt> <tt class="py-name">errors</tt><tt class="py-op">,</tt> <tt class="py-name">htdocs_directory</tt><tt class="py-op">)</tt>  </tt>
<a name="L349"></a><tt class="py-lineno">349</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt>     </tt>
<a name="L350"></a><tt class="py-lineno">350</tt>  <tt class="py-line">  </tt>
<a name="L351"></a><tt class="py-lineno">351</tt>  <tt class="py-line">  </tt>
<a name="L352"></a><tt class="py-lineno">352</tt>  <tt class="py-line">    <tt class="py-comment">#</tt> </tt>
<a name="L353"></a><tt class="py-lineno">353</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#  RETURN LOGO OVER HTTP</tt> </tt>
<a name="L354"></a><tt class="py-lineno">354</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#</tt> </tt>
<a name="L355"></a><tt class="py-lineno">355</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L356"></a><tt class="py-lineno">356</tt>  <tt class="py-line">    <tt class="py-keyword">print</tt> <tt class="py-string">"Content-Type:"</tt><tt class="py-op">,</tt> <tt id="link-114" class="py-name"><a title="weblogolib._cgi.mime_type" class="py-name" href="#" onclick="return doclink('link-114', 'mime_type', 'link-5');">mime_type</a></tt><tt class="py-op">[</tt><tt class="py-name">format</tt><tt class="py-op">]</tt> </tt>
<a name="L357"></a><tt class="py-lineno">357</tt>  <tt class="py-line">    <tt class="py-comment"># Content-Disposition: inline       Open logo in browser window</tt> </tt>
<a name="L358"></a><tt class="py-lineno">358</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># Content-Disposition: attachment   Download logo  </tt> </tt>
<a name="L359"></a><tt class="py-lineno">359</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">if</tt> <tt class="py-name">form_values</tt><tt class="py-op">.</tt><tt class="py-name">has_key</tt><tt class="py-op">(</tt><tt class="py-string">"download"</tt><tt class="py-op">)</tt> <tt class="py-op">:</tt> </tt>
<a name="L360"></a><tt class="py-lineno">360</tt>  <tt class="py-line">        <tt class="py-keyword">print</tt> <tt class="py-string">'Content-Disposition: attachment; '</tt> \ </tt>
<a name="L361"></a><tt class="py-lineno">361</tt>  <tt class="py-line">            <tt class="py-string">'filename="logo.%s"'</tt> <tt class="py-op">%</tt> <tt id="link-115" class="py-name"><a title="weblogolib._cgi.extension" class="py-name" href="#" onclick="return doclink('link-115', 'extension', 'link-6');">extension</a></tt><tt class="py-op">[</tt><tt class="py-name">format</tt><tt class="py-op">]</tt>  </tt>
<a name="L362"></a><tt class="py-lineno">362</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt> <tt class="py-op">:</tt>        </tt>
<a name="L363"></a><tt class="py-lineno">363</tt>  <tt class="py-line">        <tt class="py-keyword">print</tt> <tt class="py-string">'Content-Disposition: inline; '</tt> \ </tt>
<a name="L364"></a><tt class="py-lineno">364</tt>  <tt class="py-line">            <tt class="py-string">'filename="logo.%s"'</tt> <tt class="py-op">%</tt> <tt id="link-116" class="py-name"><a title="weblogolib._cgi.extension" class="py-name" href="#" onclick="return doclink('link-116', 'extension', 'link-6');">extension</a></tt><tt class="py-op">[</tt><tt class="py-name">format</tt><tt class="py-op">]</tt>         </tt>
<a name="L365"></a><tt class="py-lineno">365</tt>  <tt class="py-line">     </tt>
<a name="L366"></a><tt class="py-lineno">366</tt>  <tt class="py-line">         </tt>
<a name="L367"></a><tt class="py-lineno">367</tt>  <tt class="py-line">    <tt class="py-comment"># Separate header from data</tt> </tt>
<a name="L368"></a><tt class="py-lineno">368</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">print</tt>  </tt>
<a name="L369"></a><tt class="py-lineno">369</tt>  <tt class="py-line">         </tt>
<a name="L370"></a><tt class="py-lineno">370</tt>  <tt class="py-line">    <tt class="py-comment"># Finally, and at last, send the logo.</tt> </tt>
<a name="L371"></a><tt class="py-lineno">371</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">print</tt> <tt class="py-name">logo</tt><tt class="py-op">.</tt><tt class="py-name">getvalue</tt><tt class="py-op">(</tt><tt class="py-op">)</tt>         </tt>
</div><a name="L372"></a><tt class="py-lineno">372</tt>  <tt class="py-line"> </tt>
<a name="L373"></a><tt class="py-lineno">373</tt>  <tt class="py-line">   </tt>
<a name="send_form"></a><div id="send_form-def"><a name="L374"></a><tt class="py-lineno">374</tt> <a class="py-toggle" href="#" id="send_form-toggle" onclick="return toggle('send_form');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="weblogolib._cgi-module.html#send_form">send_form</a><tt class="py-op">(</tt><tt class="py-param">controls</tt><tt class="py-op">,</tt> <tt class="py-param">errors</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-param">htdocs_directory</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt> <tt class="py-op">:</tt> </tt>
</div><div id="send_form-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="send_form-expanded"><a name="L375"></a><tt class="py-lineno">375</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">htdocs_directory</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt> <tt class="py-op">:</tt> </tt>
<a name="L376"></a><tt class="py-lineno">376</tt>  <tt class="py-line">        <tt class="py-name">htdocs_directory</tt> <tt class="py-op">=</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt> </tt>
<a name="L377"></a><tt class="py-lineno">377</tt>  <tt class="py-line">            <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">dirname</tt><tt class="py-op">(</tt><tt class="py-name">__file__</tt><tt class="py-op">,</tt> <tt class="py-string">"htdocs"</tt><tt class="py-op">)</tt> <tt class="py-op">)</tt> </tt>
<a name="L378"></a><tt class="py-lineno">378</tt>  <tt class="py-line"> </tt>
<a name="L379"></a><tt class="py-lineno">379</tt>  <tt class="py-line">    <tt class="py-name">substitutions</tt> <tt class="py-op">=</tt> <tt class="py-op">{</tt><tt class="py-op">}</tt> </tt>
<a name="L380"></a><tt class="py-lineno">380</tt>  <tt class="py-line">    <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-string">"version"</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt id="link-117" class="py-name"><a title="weblogolib" class="py-name" href="#" onclick="return doclink('link-117', 'weblogolib', 'link-4');">weblogolib</a></tt><tt class="py-op">.</tt><tt id="link-118" class="py-name" targets="Variable weblogolib.release_description=weblogolib-module.html#release_description"><a title="weblogolib.release_description" class="py-name" href="#" onclick="return doclink('link-118', 'release_description', 'link-118');">release_description</a></tt>  </tt>
<a name="L381"></a><tt class="py-lineno">381</tt>  <tt class="py-line">    <tt class="py-comment"># Bug fix. Not sure why this default substitution isn't added automatically like everything else</tt> </tt>
<a name="L382"></a><tt class="py-lineno">382</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-string">'color_custom'</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">''</tt>   </tt>
<a name="L383"></a><tt class="py-lineno">383</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">c</tt> <tt class="py-keyword">in</tt> <tt class="py-name">controls</tt> <tt class="py-op">:</tt> </tt>
<a name="L384"></a><tt class="py-lineno">384</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">c</tt><tt class="py-op">.</tt><tt class="py-name">options</tt> <tt class="py-op">:</tt> </tt>
<a name="L385"></a><tt class="py-lineno">385</tt>  <tt class="py-line">            <tt class="py-keyword">for</tt> <tt class="py-name">opt</tt> <tt class="py-keyword">in</tt> <tt class="py-name">c</tt><tt class="py-op">.</tt><tt class="py-name">options</tt> <tt class="py-op">:</tt> </tt>
<a name="L386"></a><tt class="py-lineno">386</tt>  <tt class="py-line">                <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-name">opt</tt><tt class="py-op">.</tt><tt class="py-name">replace</tt><tt class="py-op">(</tt><tt class="py-string">'/'</tt><tt class="py-op">,</tt><tt class="py-string">'_'</tt><tt class="py-op">)</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">''</tt> </tt>
<a name="L387"></a><tt class="py-lineno">387</tt>  <tt class="py-line">            <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-name">c</tt><tt class="py-op">.</tt><tt class="py-name">value</tt><tt class="py-op">.</tt><tt class="py-name">replace</tt><tt class="py-op">(</tt><tt class="py-string">'/'</tt><tt class="py-op">,</tt><tt class="py-string">'_'</tt><tt class="py-op">)</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">'selected'</tt> </tt>
<a name="L388"></a><tt class="py-lineno">388</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt> <tt class="py-op">:</tt> </tt>
<a name="L389"></a><tt class="py-lineno">389</tt>  <tt class="py-line">            <tt class="py-name">value</tt> <tt class="py-op">=</tt> <tt class="py-name">c</tt><tt class="py-op">.</tt><tt class="py-name">value</tt> </tt>
<a name="L390"></a><tt class="py-lineno">390</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">value</tt> <tt class="py-op">==</tt> <tt class="py-name">None</tt> <tt class="py-op">:</tt> <tt class="py-name">value</tt> <tt class="py-op">=</tt> <tt class="py-string">'auto'</tt> </tt>
<a name="L391"></a><tt class="py-lineno">391</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">value</tt><tt class="py-op">==</tt><tt class="py-string">'true'</tt><tt class="py-op">:</tt> </tt>
<a name="L392"></a><tt class="py-lineno">392</tt>  <tt class="py-line">                <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-name">c</tt><tt class="py-op">.</tt><tt class="py-name">name</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">'checked'</tt> </tt>
<a name="L393"></a><tt class="py-lineno">393</tt>  <tt class="py-line">            <tt class="py-keyword">elif</tt> <tt class="py-name">type</tt><tt class="py-op">(</tt><tt class="py-name">value</tt><tt class="py-op">)</tt><tt class="py-op">==</tt><tt class="py-name">bool</tt> <tt class="py-op">:</tt> </tt>
<a name="L394"></a><tt class="py-lineno">394</tt>  <tt class="py-line">                <tt class="py-keyword">if</tt> <tt class="py-name">value</tt> <tt class="py-op">:</tt> </tt>
<a name="L395"></a><tt class="py-lineno">395</tt>  <tt class="py-line">                    <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-name">c</tt><tt class="py-op">.</tt><tt class="py-name">name</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">'checked'</tt> </tt>
<a name="L396"></a><tt class="py-lineno">396</tt>  <tt class="py-line">                <tt class="py-keyword">else</tt> <tt class="py-op">:</tt> </tt>
<a name="L397"></a><tt class="py-lineno">397</tt>  <tt class="py-line">                    <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-name">c</tt><tt class="py-op">.</tt><tt class="py-name">name</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">''</tt> </tt>
<a name="L398"></a><tt class="py-lineno">398</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt> <tt class="py-op">:</tt> </tt>
<a name="L399"></a><tt class="py-lineno">399</tt>  <tt class="py-line">                <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-name">c</tt><tt class="py-op">.</tt><tt class="py-name">name</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">str</tt><tt class="py-op">(</tt><tt class="py-name">value</tt><tt class="py-op">)</tt>             </tt>
<a name="L400"></a><tt class="py-lineno">400</tt>  <tt class="py-line">        <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-name">c</tt><tt class="py-op">.</tt><tt class="py-name">name</tt><tt class="py-op">+</tt><tt class="py-string">'_err'</tt><tt class="py-op">]</tt>  <tt class="py-op">=</tt> <tt class="py-string">''</tt> </tt>
<a name="L401"></a><tt class="py-lineno">401</tt>  <tt class="py-line">    <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-string">'logo_range_err'</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">''</tt> </tt>
<a name="L402"></a><tt class="py-lineno">402</tt>  <tt class="py-line">    </tt>
<a name="L403"></a><tt class="py-lineno">403</tt>  <tt class="py-line">    <tt class="py-comment"># Disable graphics options if necessary auxiliary programs are not installed.</tt> </tt>
<a name="L404"></a><tt class="py-lineno">404</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L405"></a><tt class="py-lineno">405</tt>  <tt class="py-line">        <tt class="py-name">command</tt> <tt class="py-op">=</tt> <tt class="py-name">find_command</tt><tt class="py-op">(</tt><tt class="py-string">'gs'</tt><tt class="py-op">)</tt> </tt>
<a name="L406"></a><tt class="py-lineno">406</tt>  <tt class="py-line">    <tt class="py-keyword">except</tt> <tt class="py-name">EnvironmentError</tt><tt class="py-op">:</tt> </tt>
<a name="L407"></a><tt class="py-lineno">407</tt>  <tt class="py-line">        <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L408"></a><tt class="py-lineno">408</tt>  <tt class="py-line">            <tt class="py-name">command</tt> <tt class="py-op">=</tt> <tt class="py-name">find_command</tt><tt class="py-op">(</tt><tt class="py-string">'gswin32c.exe'</tt><tt class="py-op">)</tt> </tt>
<a name="L409"></a><tt class="py-lineno">409</tt>  <tt class="py-line">        <tt class="py-keyword">except</tt> <tt class="py-name">EnvironmentError</tt><tt class="py-op">:</tt> </tt>
<a name="L410"></a><tt class="py-lineno">410</tt>  <tt class="py-line">            <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-string">'png_print'</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">'disabled="disabled"'</tt> </tt>
<a name="L411"></a><tt class="py-lineno">411</tt>  <tt class="py-line">            <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-string">'png'</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">'disabled="disabled"'</tt> </tt>
<a name="L412"></a><tt class="py-lineno">412</tt>  <tt class="py-line">            <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-string">'jpeg'</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">'disabled="disabled"'</tt> </tt>
<a name="L413"></a><tt class="py-lineno">413</tt>  <tt class="py-line">            <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-string">'pdf'</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">'disabled="disabled"'</tt> </tt>
<a name="L414"></a><tt class="py-lineno">414</tt>  <tt class="py-line">            <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-string">'svg'</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">'disabled="disabled"'</tt> </tt>
<a name="L415"></a><tt class="py-lineno">415</tt>  <tt class="py-line">            <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-string">'eps'</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">'selected="selected"'</tt> </tt>
<a name="L416"></a><tt class="py-lineno">416</tt>  <tt class="py-line">    <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L417"></a><tt class="py-lineno">417</tt>  <tt class="py-line">        <tt class="py-name">command</tt> <tt class="py-op">=</tt> <tt class="py-name">find_command</tt><tt class="py-op">(</tt><tt class="py-string">'pdf2svg'</tt><tt class="py-op">)</tt> </tt>
<a name="L418"></a><tt class="py-lineno">418</tt>  <tt class="py-line">    <tt class="py-keyword">except</tt> <tt class="py-name">EnvironmentError</tt><tt class="py-op">:</tt> </tt>
<a name="L419"></a><tt class="py-lineno">419</tt>  <tt class="py-line">        <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-string">'svg'</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">'disabled="disabled"'</tt> </tt>
<a name="L420"></a><tt class="py-lineno">420</tt>  <tt class="py-line">        </tt>
<a name="L421"></a><tt class="py-lineno">421</tt>  <tt class="py-line">     </tt>
<a name="L422"></a><tt class="py-lineno">422</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">errors</tt> <tt class="py-op">:</tt> </tt>
<a name="L423"></a><tt class="py-lineno">423</tt>  <tt class="py-line">        <tt class="py-keyword">print</tt> <tt class="py-op">&gt;&gt;</tt><tt class="py-name">sys</tt><tt class="py-op">.</tt><tt class="py-name">stderr</tt><tt class="py-op">,</tt> <tt class="py-name">errors</tt> </tt>
<a name="L424"></a><tt class="py-lineno">424</tt>  <tt class="py-line">        <tt class="py-name">error_message</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L425"></a><tt class="py-lineno">425</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">e</tt> <tt class="py-keyword">in</tt> <tt class="py-name">errors</tt> <tt class="py-op">:</tt> </tt>
<a name="L426"></a><tt class="py-lineno">426</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">type</tt><tt class="py-op">(</tt><tt class="py-name">e</tt><tt class="py-op">)</tt> <tt class="py-keyword">is</tt> <tt class="py-name">str</tt> <tt class="py-op">:</tt> </tt>
<a name="L427"></a><tt class="py-lineno">427</tt>  <tt class="py-line">                <tt class="py-name">msg</tt> <tt class="py-op">=</tt> <tt class="py-name">e</tt> </tt>
<a name="L428"></a><tt class="py-lineno">428</tt>  <tt class="py-line">            <tt class="py-keyword">elif</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">e</tt><tt class="py-op">)</tt><tt class="py-op">==</tt><tt class="py-number">2</tt><tt class="py-op">:</tt> </tt>
<a name="L429"></a><tt class="py-lineno">429</tt>  <tt class="py-line">                <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-name">e</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">+</tt><tt class="py-string">"_err"</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">"class='error'"</tt>     </tt>
<a name="L430"></a><tt class="py-lineno">430</tt>  <tt class="py-line">                <tt class="py-name">msg</tt> <tt class="py-op">=</tt> <tt class="py-name">e</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> </tt>
<a name="L431"></a><tt class="py-lineno">431</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt> <tt class="py-op">:</tt> </tt>
<a name="L432"></a><tt class="py-lineno">432</tt>  <tt class="py-line">                <tt class="py-name">msg</tt> <tt class="py-op">=</tt> <tt class="py-name">e</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
<a name="L433"></a><tt class="py-lineno">433</tt>  <tt class="py-line"> </tt>
<a name="L434"></a><tt class="py-lineno">434</tt>  <tt class="py-line"> </tt>
<a name="L435"></a><tt class="py-lineno">435</tt>  <tt class="py-line">            <tt class="py-name">error_message</tt> <tt class="py-op">+=</tt>  <tt class="py-string">"ERROR: "</tt>  </tt>
<a name="L436"></a><tt class="py-lineno">436</tt>  <tt class="py-line">            <tt class="py-name">error_message</tt> <tt class="py-op">+=</tt>  <tt class="py-name">msg</tt> </tt>
<a name="L437"></a><tt class="py-lineno">437</tt>  <tt class="py-line">            <tt class="py-name">error_message</tt> <tt class="py-op">+=</tt> <tt class="py-string">' &lt;br /&gt;'</tt> </tt>
<a name="L438"></a><tt class="py-lineno">438</tt>  <tt class="py-line">             </tt>
<a name="L439"></a><tt class="py-lineno">439</tt>  <tt class="py-line">        <tt class="py-name">error_message</tt> <tt class="py-op">+=</tt> \ </tt>
<a name="L440"></a><tt class="py-lineno">440</tt>  <tt class="py-line">            <tt class="py-string">"&lt;input style='float:right; font-size:small' type='submit' name='cmd_validate' value='Clear Error' /&gt; "</tt> </tt>
<a name="L441"></a><tt class="py-lineno">441</tt>  <tt class="py-line">        <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-string">"error_message"</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">''</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">error_message</tt><tt class="py-op">)</tt> </tt>
<a name="L442"></a><tt class="py-lineno">442</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt> <tt class="py-op">:</tt> </tt>
<a name="L443"></a><tt class="py-lineno">443</tt>  <tt class="py-line">        <tt class="py-name">substitutions</tt><tt class="py-op">[</tt><tt class="py-string">"error_message"</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">""</tt> </tt>
<a name="L444"></a><tt class="py-lineno">444</tt>  <tt class="py-line">     </tt>
<a name="L445"></a><tt class="py-lineno">445</tt>  <tt class="py-line">         </tt>
<a name="L446"></a><tt class="py-lineno">446</tt>  <tt class="py-line">    <tt class="py-name">template</tt> <tt class="py-op">=</tt> <tt id="link-119" class="py-name" targets="Function weblogolib._cgi.resource_string()=weblogolib._cgi-module.html#resource_string"><a title="weblogolib._cgi.resource_string" class="py-name" href="#" onclick="return doclink('link-119', 'resource_string', 'link-119');">resource_string</a></tt><tt class="py-op">(</tt> <tt class="py-string">"create_html_template.html"</tt><tt class="py-op">,</tt> <tt class="py-name">htdocs_directory</tt><tt class="py-op">)</tt> </tt>
<a name="L447"></a><tt class="py-lineno">447</tt>  <tt class="py-line">    <tt class="py-name">html</tt> <tt class="py-op">=</tt> <tt class="py-name">Template</tt><tt class="py-op">(</tt><tt class="py-name">template</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">safe_substitute</tt><tt class="py-op">(</tt><tt class="py-name">substitutions</tt><tt class="py-op">)</tt> <tt class="py-comment">#FIXME</tt> </tt>
<a name="L448"></a><tt class="py-lineno">448</tt>  <tt class="py-line"> </tt>
<a name="L449"></a><tt class="py-lineno">449</tt>  <tt class="py-line">    <tt class="py-keyword">print</tt> <tt class="py-string">"Content-Type: text/html\n\n"</tt> </tt>
<a name="L450"></a><tt class="py-lineno">450</tt>  <tt class="py-line">    <tt class="py-keyword">print</tt> <tt class="py-name">html</tt> </tt>
</div><a name="L451"></a><tt class="py-lineno">451</tt>  <tt class="py-line"> </tt>
<a name="L452"></a><tt class="py-lineno">452</tt>  <tt class="py-line">    <tt class="py-comment"># DEBUG</tt> </tt>
<a name="L453"></a><tt class="py-lineno">453</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#keys = substitutions.keys()</tt> </tt>
<a name="L454"></a><tt class="py-lineno">454</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#keys.sort()</tt> </tt>
<a name="L455"></a><tt class="py-lineno">455</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#for k in keys :</tt> </tt>
<a name="L456"></a><tt class="py-lineno">456</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#    print k,"=", substitutions[k], " &lt;br /&gt;" </tt> </tt>
<a name="L457"></a><tt class="py-lineno">457</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L458"></a><tt class="py-lineno">458</tt>  <tt class="py-line">    <tt class="py-comment">#print " &lt;br /&gt;"</tt> </tt>
<a name="L459"></a><tt class="py-lineno">459</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#print " &lt;br /&gt;"</tt> </tt>
<a name="L460"></a><tt class="py-lineno">460</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#for k in controls :</tt> </tt>
<a name="L461"></a><tt class="py-lineno">461</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#    print k.name,"=", k.get_value(), " &lt;br /&gt;" </tt> </tt>
<a name="L462"></a><tt class="py-lineno">462</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L463"></a><tt class="py-lineno">463</tt>  <tt class="py-line"> </tt>
<a name="L464"></a><tt class="py-lineno">464</tt>  <tt class="py-line"> </tt>
<a name="L465"></a><tt class="py-lineno">465</tt>  <tt class="py-line"><tt class="py-keyword">if</tt> <tt class="py-name">__name__</tt><tt class="py-op">==</tt><tt class="py-string">"__main__"</tt> <tt class="py-op">:</tt> </tt>
<a name="L466"></a><tt class="py-lineno">466</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt id="link-120" class="py-name" targets="Module weblogolib._cli=weblogolib._cli-module.html"><a title="weblogolib._cli" class="py-name" href="#" onclick="return doclink('link-120', '_cli', 'link-120');">_cli</a></tt> </tt>
<a name="L467"></a><tt class="py-lineno">467</tt>  <tt class="py-line">    <tt id="link-121" class="py-name"><a title="weblogolib._cli" class="py-name" href="#" onclick="return doclink('link-121', '_cli', 'link-120');">_cli</a></tt><tt class="py-op">.</tt><tt id="link-122" class="py-name" targets="Function weblogolib._cgi.main()=weblogolib._cgi-module.html#main,Function weblogolib._cli.main()=weblogolib._cli-module.html#main"><a title="weblogolib._cgi.main
weblogolib._cli.main" class="py-name" href="#" onclick="return doclink('link-122', 'main', 'link-122');">main</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L468"></a><tt class="py-lineno">468</tt>  <tt class="py-line"> </tt><script type="text/javascript">
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